Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_E16
         (555 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    22   4.8  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   4.8  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   4.8  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    21   6.3  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    21   6.3  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   6.3  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   8.4  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   8.4  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 475 DPVFDALFGCQYVICSFQHN 416
           DP+FD       VIC   H+
Sbjct: 212 DPIFDKKAMSDLVICKLSHS 231


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 475 DPVFDALFGCQYVICSFQHN 416
           DP+FD       VIC   H+
Sbjct: 212 DPIFDKKAMSDLVICKLSHS 231


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -1

Query: 468  YSTRFLVASTXSAVSNITRSL 406
            +S + +VAS+ S V+N+T +L
Sbjct: 943  HSAQSVVASSASNVTNVTTNL 963


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 70  YGKSRKEIRKNSKATI*RRKYVERSPQ 150
           Y +SR+  +K+ K     RKY ERS +
Sbjct: 39  YSRSREREQKSYKNERKYRKYRERSKE 65


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 70  YGKSRKEIRKNSKATI*RRKYVERSPQ 150
           Y +SR+  +K+ K     RKY ERS +
Sbjct: 39  YSRSREREQKSYKNERKYRKYRERSKE 65


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -2

Query: 404 YLVFEPRYEVIHSYARC 354
           Y ++ PRY + +S ++C
Sbjct: 54  YYIYNPRYPLPYSGSKC 70


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -2

Query: 332 VCFLVSDCAECLRWSLPDDHPSLVTSLLFY 243
           +C ++  C   L W LP +  +    LL+Y
Sbjct: 292 ICHIL--CMSDLHWQLPHNSTNPPNILLYY 319


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 197 TTGIENIRQNDEN 235
           TTG+EN R N+ N
Sbjct: 10  TTGLENWRVNNSN 22


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,481
Number of Sequences: 438
Number of extensions: 3404
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)