Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_E15
(656 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1711.13 |his2||histidinol dehydrogenase His2 |Schizosaccharo... 31 0.15
SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inosito... 29 0.78
SPAC6F6.12 |||autophagy associated protein Atg24|Schizosaccharom... 28 1.0
SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase Ubp3|Schizosacc... 28 1.4
SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces po... 27 1.8
SPBC11C11.10 ||SPBC3B8.13c|pseudouridine synthase|Schizosaccharo... 27 3.1
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 26 4.2
SPBC19G7.07c |||conserved fungal protein|Schizosaccharomyces pom... 26 5.5
SPAC15A10.06 |||CPA1 sodium ion/proton antiporter|Schizosaccharo... 25 7.3
SPBC19G7.16 |iws1||transcription elongation factor complex subun... 25 7.3
SPBC13G1.14c |||RNA-binding protein|Schizosaccharomyces pombe|ch... 25 9.6
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 9.6
SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ... 25 9.6
SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase Wis1|Schizosaccha... 25 9.6
>SPBC1711.13 |his2||histidinol dehydrogenase His2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 31.1 bits (67), Expect = 0.15
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 218 VVDYAKKKSYDDMLRQVQDSTTDDDLLRISEEMFNADINNAFNYI 352
++DYA K + V + DDDL++IS M DI+ AFN I
Sbjct: 54 LIDYASKFEKVQLKSAVLKAPFDDDLMKIS-PMIKEDIDIAFNNI 97
>SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inositol
pyrophosphate synthase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 920
Score = 28.7 bits (61), Expect = 0.78
Identities = 22/91 (24%), Positives = 39/91 (42%)
Frame = +2
Query: 266 VQDSTTDDDLLRISEEMFNADINNAFNYIQVSLQGKTSPMSKNDEASSNLLNVPENVWSG 445
++ T DLL++ +++ + D N A + + + S + D A PEN+
Sbjct: 549 LEQETIPSDLLKVRKDLLD-DSNAAKDTMDKVKKHLKSLLRVGDTARKEF-TWPENMPKP 606
Query: 446 PTIRPFVALFDNYHKNVIRPEFVTPNEETEQ 538
+ V YH+ V+R F+ E EQ
Sbjct: 607 CEVMQQVVQLMKYHRAVMRENFIILGPEVEQ 637
>SPAC6F6.12 |||autophagy associated protein
Atg24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 401
Score = 28.3 bits (60), Expect = 1.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 344 NYIQVSLQGKTSPMSKNDEASSNLLNVPENVWSGPT 451
NY++ +Q K + SK DE S +LLN + PT
Sbjct: 139 NYVRFFIQPKLNNTSKLDEISDSLLNAFSKLKEEPT 174
>SPBP8B7.21 |ubp3||ubiquitin C-terminal hydrolase
Ubp3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 512
Score = 27.9 bits (59), Expect = 1.4
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2
Query: 625 IHVSQPFTNKEIHKGTNRSGGEYSVDVRCL 536
IH H GT+ SGG Y+VDV+ L
Sbjct: 432 IHPEYDLNAVVYHHGTSASGGHYTVDVQQL 461
>SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 471
Score = 27.5 bits (58), Expect = 1.8
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 188 LQQIGTVVGGVVDYAKKKSYDDML--RQVQDSTTDDDLLRISEEMFNADINNAFNYIQ 355
L+++G+ GVV A++ D++ +Q+ T DD+ I +E+F N+ N IQ
Sbjct: 12 LRKLGSGSFGVVWKARENVSGDIIAIKQIDLETGIDDITDIEQEVFMLSNCNSSNVIQ 69
>SPBC11C11.10 ||SPBC3B8.13c|pseudouridine
synthase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 407
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 251 DMLRQVQDSTTDDDLLRISEEMFNADINNAFNYIQVSLQG 370
D+ RQV DL+R+ + F D N F++ + S G
Sbjct: 349 DLGRQVNSEAHMVDLVRLKQGSFALDDENCFDFSEFSAPG 388
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 26.2 bits (55), Expect = 4.2
Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Frame = +2
Query: 308 EEMFNADINNAFNYIQVSLQGKTSPMSKNDEASSNLLNVPENVWSGPTI-RPFVALFDNY 484
E+ F D + N I Q + P + + L P + + F F+N
Sbjct: 178 EDDFEIDPDTDLNSILHRKQNRMDPKASFSSVEQSSLRTPSSAHNDDGFWDDFDIDFNNE 237
Query: 485 HKNVIRPEFVTPNEETEQTTYINTILATGP 574
+++ R + +PN ++ YI++ ++ P
Sbjct: 238 TESIFRKKIRSPNTINQKHPYISSTISYQP 267
>SPBC19G7.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 687
Score = 25.8 bits (54), Expect = 5.5
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 371 KTSPMSKNDEASSNLLNVPENVWSGPTIRPFVALFDNYHKNVIRPEFVTPNEETEQTTYI 550
K + ND + LN+P+ VW+ F++ ++Y K T N E +T
Sbjct: 73 KLKDVKLNDINKKSPLNIPDEVWT-----KFISEVNSYDKEK-ENHLSTGNHELRRT--- 123
Query: 551 NTILATGP-IRTLMNFLVSKGLTHMNEY 631
T L GP + T + L SK T N Y
Sbjct: 124 -TPLKIGPLLLTRIGLLKSKN-TASNNY 149
>SPAC15A10.06 |||CPA1 sodium ion/proton
antiporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 25.4 bits (53), Expect = 7.3
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 38 MRIILILLVSLGLCHADDIAQAAGQIFNSILPNLISNSVTGQQGNTAQNTLQQIGTVV 211
M + LI+ VS GL + ++ + FN +LP +I NS G + + + N + IGT++
Sbjct: 73 MVVGLIIRVSPGLIIQNMVSFHSTYFFNVLLPPIILNS--GYELHQS-NFFRNIGTIL 127
>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 233 KKKSYDDMLRQVQDSTTDDDLLRISEEMFNADINNA 340
KK+S +D L Q+ DD++LR+ E+M A + +A
Sbjct: 173 KKRSNEDNLEQM----ADDEVLRLREQMRLAALRDA 204
>SPBC13G1.14c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 243
Score = 25.0 bits (52), Expect = 9.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 31 SQNENNFNITGFSRAMSCR*HSSSGWSNI*QY 126
SQN +++N F R+ R S S SNI +Y
Sbjct: 198 SQNNSHYNDKSFHRSRYSRARSRSPGSNISEY 229
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.0 bits (52), Expect = 9.6
Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
Frame = +2
Query: 161 QQGNTAQNTLQQIGTVVG---GVVDYAKKKSYDDMLRQV---QDSTTDDDLLRISEEMFN 322
Q+G + L+ GT +G G D + DD L ++ +D+ DL
Sbjct: 3899 QEGKSNSGELES-GTGLGSGVGAEDITNTLNEDDDLEELANEEDTANQSDLDESEARELE 3957
Query: 323 ADINNAFNYIQVSLQGKTSPMSKNDEASSNLLNVPENV 436
+D+N VS + +N + + ++PE++
Sbjct: 3958 SDMNGVTKDSVVSENENSDSEEENQDLDEEVNDIPEDL 3995
>SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 570
Score = 25.0 bits (52), Expect = 9.6
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 323 ADINNAFNYIQVSLQGKTSPMSKNDEASSNLLNVPENVWSG 445
+DI A NY S+ +T ++ + +V +NVW G
Sbjct: 307 SDIRGANNYGWTSILVRTGIFQGDNSPKYSAKHVSDNVWEG 347
>SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase
Wis1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 605
Score = 25.0 bits (52), Expect = 9.6
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 350 IQVSLQGKTSPMSKNDEASSNLLNVPENVWSGPTIRPFVALFD 478
+ +S TSP+S + AS LN+P + + PF D
Sbjct: 241 LDLSNSNPTSPVSPSSMASRRGLNIPPTLKQAVSETPFSTFSD 283
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,551,487
Number of Sequences: 5004
Number of extensions: 50008
Number of successful extensions: 150
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 297805304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -