Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_E14
(521 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092) 32 0.33
SB_41926| Best HMM Match : HALZ (HMM E-Value=0.17) 31 0.76
SB_5625| Best HMM Match : DBR1 (HMM E-Value=1.1e-26) 30 1.3
SB_29415| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_26424| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_10572| Best HMM Match : Glyco_hydro_12 (HMM E-Value=3) 28 4.1
SB_21059| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_13699| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_50720| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_39468| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_11202| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_52688| Best HMM Match : Gpi1 (HMM E-Value=1.8) 27 9.4
SB_48722| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_46021| Best HMM Match : C1_1 (HMM E-Value=1.1) 27 9.4
SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_53426| Best HMM Match : THAP (HMM E-Value=0.00058) 27 9.4
SB_25623| Best HMM Match : THAP (HMM E-Value=0.00058) 27 9.4
>SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092)
Length = 341
Score = 31.9 bits (69), Expect = 0.33
Identities = 13/44 (29%), Positives = 28/44 (63%)
Frame = +1
Query: 322 NEALAKQYGAGKDNFPVVKLFLKGKSEPISFNDAKGFTTDELRR 453
+E A++Y + V+LF+K + +P+ + +A+G+ T+E R+
Sbjct: 29 SECSAEEYCTAA--YKAVELFVKLEGKPVQYREAEGYETEEFRK 70
>SB_41926| Best HMM Match : HALZ (HMM E-Value=0.17)
Length = 659
Score = 30.7 bits (66), Expect = 0.76
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +1
Query: 274 ELLIAEVGVKDYGEKDNEALAKQYGAGKDNFPVVKLFLKGKSEPISFNDAKGF 432
++LIA++ Y ++D++ + G GK++ +KL LK E + DAK +
Sbjct: 199 KMLIADINELKYQQEDSKTSTDEEGEGKEDVTFLKLALKKAREDL---DAKNY 248
>SB_5625| Best HMM Match : DBR1 (HMM E-Value=1.1e-26)
Length = 566
Score = 29.9 bits (64), Expect = 1.3
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +1
Query: 178 FDAAL-VKFDVAFPYG-DKHEAFVALAKDAKYVDELLIAEVG 297
F A L VKF P+G DK+ F+AL K Y D L + +VG
Sbjct: 223 FSAHLHVKFPAIIPHGGDKNTKFLALDKCLPYRDFLQVLDVG 264
>SB_29415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 483
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 346 RIASLALHYPFHRNLSRRLRLSKVHPHISRPL 251
RI + H P R L RR+ HPH+ R L
Sbjct: 245 RIVNYPTHPPLRRELVRRIVNYPTHPHLRREL 276
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 346 RIASLALHYPFHRNLSRRLRLSKVHPHISRPL 251
RI + H P R L RR+ HPH+ R L
Sbjct: 381 RIVNYPTHPPLRRELVRRIVNYPTHPHLRREL 412
>SB_26424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 662
Score = 28.7 bits (61), Expect = 3.1
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +1
Query: 250 AKDAKYVDELLIAEV---GVKDYGEKDNEALAKQYGAGKDNFPVVKLFLKGKSEPIS 411
A AKYVD+L + E+ Y + E + QY A K ++L L K+ I+
Sbjct: 418 ATRAKYVDDLTVLEIIPRNSPSYYTERMELINNQYEADKAKLQKIRLLLARKNREIA 474
>SB_10572| Best HMM Match : Glyco_hydro_12 (HMM E-Value=3)
Length = 294
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 10 VTIKCNIIL*SLQKLMMQYRLLFLCISLVIPSTYQASTSSGSVEL 144
+T+K + SL KL +Y +LFLC S QA SSG + +
Sbjct: 136 ITLKATDVSTSLSKLDKKY-ILFLCNLRTCLSDLQADRSSGRIRV 179
>SB_21059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1024
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 343 IASLALHYPFHRNLSRRLRLSKVHPHISRPLQVPRRL 233
+A L ++ HR L ++ R + + SR +Q+ RRL
Sbjct: 941 VAVLVAYFAIHRGLKKQSRAANTNTADSRRVQIERRL 977
>SB_13699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 27.5 bits (58), Expect = 7.1
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Frame = -2
Query: 391 LLKIVLLLGNY---LFQHRIASLALHYP--FHRNLSRRLRLSKVH-PHISRPLQVPR 239
+ ++V +GNY + QH + +A H P H NL+ R R H H RP+ R
Sbjct: 1 MAQLVDNVGNYCEWVCQHFLCPVAQHRPSHIHANLNTRKRTLHAHYTHTKRPIHDTR 57
>SB_50720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 433
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 394 YLLKIVLLLGNYLFQHRIASLALHYPFHRNLSRRLRLS 281
+ L + ++L NYL HR+A R+L R +R++
Sbjct: 234 FFLPLFIILVNYLMIHRVARRRARARHLRSLKREIRIA 271
>SB_39468| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1778
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -1
Query: 194 TSAASNLLITLLKDNSSNSTEPLDVEAW*VEGITKDIHKNNK 69
TS ++NLL T K S EP + A + GI + K+NK
Sbjct: 848 TSPSNNLLNTESKTKESTDEEPSHIAASALYGIDRADEKHNK 889
>SB_11202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1822
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 28 IIL*SLQKLMMQYRLLFLCISLVIPSTYQ 114
I+ SL L+ +YRL +C+SLV+ S Y+
Sbjct: 903 IVRVSLLVLVSRYRLDIVCVSLVLVSRYR 931
>SB_52688| Best HMM Match : Gpi1 (HMM E-Value=1.8)
Length = 475
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/66 (24%), Positives = 28/66 (42%)
Frame = +1
Query: 103 STYQASTSSGSVELDELSFNKVISKFDAALVKFDVAFPYGDKHEAFVALAKDAKYVDELL 282
S YQA D++ F +S FD +V F+ PY + +L +++ L+
Sbjct: 191 SVYQAPDKDFFQSPDKVRFYTGLSSFDILMVVFEHVSPYVSRRSDLTSLNSFQEFIIVLM 250
Query: 283 IAEVGV 300
+ V
Sbjct: 251 KLRLNV 256
>SB_48722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/66 (24%), Positives = 28/66 (42%)
Frame = +1
Query: 103 STYQASTSSGSVELDELSFNKVISKFDAALVKFDVAFPYGDKHEAFVALAKDAKYVDELL 282
S YQA D++ F +S FD +V F+ PY + +L +++ L+
Sbjct: 76 SVYQAPDKDFFQSPDKVRFYTGLSSFDILMVVFEHVSPYVSRRSDLTSLNSFQEFIIVLM 135
Query: 283 IAEVGV 300
+ V
Sbjct: 136 KLRLNV 141
>SB_46021| Best HMM Match : C1_1 (HMM E-Value=1.1)
Length = 632
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/66 (24%), Positives = 28/66 (42%)
Frame = +1
Query: 103 STYQASTSSGSVELDELSFNKVISKFDAALVKFDVAFPYGDKHEAFVALAKDAKYVDELL 282
S YQA D++ F +S FD +V F+ PY + +L +++ L+
Sbjct: 323 SVYQAPDKDFFQSPDKVRFYTGLSSFDILMVVFEHVSPYVSRRSDLTSLNSFQEFIIVLM 382
Query: 283 IAEVGV 300
+ V
Sbjct: 383 KLRLNV 388
>SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4924
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -3
Query: 252 CKCHEGFMFVSIRERNVEFNKCCIKFTNNFIER*FI*FHGTARC 121
C C G+ F + R ++ N+C + N + E I GT RC
Sbjct: 2129 CDCPRGYTFDNSSRRCIDINEC--ERNNGWCEHDCINILGTYRC 2170
>SB_53426| Best HMM Match : THAP (HMM E-Value=0.00058)
Length = 531
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/66 (24%), Positives = 28/66 (42%)
Frame = +1
Query: 103 STYQASTSSGSVELDELSFNKVISKFDAALVKFDVAFPYGDKHEAFVALAKDAKYVDELL 282
S YQA D++ F +S FD +V F+ PY + +L +++ L+
Sbjct: 222 SVYQAPDKDFFQSPDKVRFYTGLSSFDILMVVFEHVSPYVSRRSDLTSLNSFQEFIIVLM 281
Query: 283 IAEVGV 300
+ V
Sbjct: 282 KLRLNV 287
>SB_25623| Best HMM Match : THAP (HMM E-Value=0.00058)
Length = 538
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/66 (24%), Positives = 28/66 (42%)
Frame = +1
Query: 103 STYQASTSSGSVELDELSFNKVISKFDAALVKFDVAFPYGDKHEAFVALAKDAKYVDELL 282
S YQA D++ F +S FD +V F+ PY + +L +++ L+
Sbjct: 229 SVYQAPDKDFFQSPDKVRFYTGLSSFDILMVVFEHVSPYVSRRSDLTSLNSFQEFIIVLM 288
Query: 283 IAEVGV 300
+ V
Sbjct: 289 KLRLNV 294
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,252,594
Number of Sequences: 59808
Number of extensions: 264438
Number of successful extensions: 679
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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