Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_E13
(596 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia nu... 74 3e-12
UniRef50_Q3WGB8 Cluster: Putative uncharacterized protein; n=8; ... 36 0.96
UniRef50_A2ELI0 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_A6QSA2 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_UPI0000EBCDB3 Cluster: PREDICTED: similar to procollage... 34 2.2
UniRef50_A3JKG0 Cluster: Putative ATP-dependent helicase; n=1; M... 33 3.9
UniRef50_Q14VU5 Cluster: ORF13; n=1; Ranid herpesvirus 1|Rep: OR... 33 6.7
UniRef50_Q89EV2 Cluster: Blr6968 protein; n=1; Bradyrhizobium ja... 32 8.9
UniRef50_Q2W0U5 Cluster: Putative uncharacterized protein; n=2; ... 32 8.9
UniRef50_Q5KNJ2 Cluster: Putative uncharacterized protein; n=2; ... 32 8.9
UniRef50_A6R297 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
>UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia
nubilalis|Rep: Reverse transcriptase - Ostrinia
nubilalis (European corn borer)
Length = 497
Score = 73.7 bits (173), Expect = 3e-12
Identities = 30/40 (75%), Positives = 34/40 (85%)
Frame = -2
Query: 151 TRWTDDLVKVAGIRWMRVAQNRSSWRSFGETYVQQWTSFG 32
TRWTDDLVKVAG WM+ AQ+RS W+S GE +VQQWTSFG
Sbjct: 458 TRWTDDLVKVAGSTWMQAAQDRSLWKSLGEAFVQQWTSFG 497
Score = 38.7 bits (86), Expect = 0.10
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -3
Query: 216 GLRVLEWLPRTGRRSLGRPP 157
G +VLEW PR GRRS+GRPP
Sbjct: 438 GRKVLEWRPRAGRRSVGRPP 457
>UniRef50_Q3WGB8 Cluster: Putative uncharacterized protein; n=8;
Bacteria|Rep: Putative uncharacterized protein - Frankia
sp. EAN1pec
Length = 1835
Score = 35.5 bits (78), Expect = 0.96
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 61 SPQKTSKTTGFAPPA-SSEFPQPSPDRRSTLWTWWSTQATSSGTW 192
+P S G PPA P+P R+ W+WW A ++GTW
Sbjct: 1754 TPLGPSAAIGDTPPAYPRSITHPTPTERNGSWSWWEPDA-AAGTW 1797
>UniRef50_A2ELI0 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1434
Score = 35.1 bits (77), Expect = 1.3
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 28 FNRKMSTAEHRSPQKTSKTTGFAPPASSEFPQPS 129
F+ ++T+ H SP+K +K + PP S+ PQPS
Sbjct: 1153 FSPLIATSRHISPRKQTKRSSLPPPHKSKIPQPS 1186
>UniRef50_A6QSA2 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative uncharacterized
protein - Ajellomyces capsulatus NAm1
Length = 2168
Score = 35.1 bits (77), Expect = 1.3
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +1
Query: 25 PFNRKMSTAEHRSPQKTSKTTGFAPPASSEFPQ---PSPDRRSTLWTWWSTQATSS 183
P + ST +H +KTS ++ F+ + P P P R ST + ST ATSS
Sbjct: 1397 PLLVQFSTGQHHERRKTSGSSSFSHQSGGSLPPGSYPEPPRLSTSFKMMSTSATSS 1452
>UniRef50_UPI0000EBCDB3 Cluster: PREDICTED: similar to procollagen
alpha 2(V); n=1; Bos taurus|Rep: PREDICTED: similar to
procollagen alpha 2(V) - Bos taurus
Length = 491
Score = 34.3 bits (75), Expect = 2.2
Identities = 23/61 (37%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -3
Query: 279 RNTTVCQGESGMRRSTENQINGLRVLEWLPRTGRRSLGRPP-GPQGGPTIW*RLREFAGC 103
R+T C+G G V E LP G RS RPP P G P + R E AG
Sbjct: 147 RSTKGCRGLGGEVGGARRGCEARSVPETLPGRGARSPPRPPSSPGGNPRLRARAAETAGS 206
Query: 102 G 100
G
Sbjct: 207 G 207
>UniRef50_A3JKG0 Cluster: Putative ATP-dependent helicase; n=1;
Marinobacter sp. ELB17|Rep: Putative ATP-dependent
helicase - Marinobacter sp. ELB17
Length = 868
Score = 33.5 bits (73), Expect = 3.9
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = -1
Query: 236 PQRIKLTAYGFSNGYHVPEDVAWVDHQVHKVDRRSGEGCGNSLDAGGAK-PVVLEVFWGD 60
PQ +++T GF YH + D + G CGN LD G K PV + WG
Sbjct: 468 PQDMEMTDTGFL--YHRDTRAIFTDSDNKPMAGHMGAQCGNLLDVPGKKMPVRCDYTWGA 525
Query: 59 -LCSA 48
LC+A
Sbjct: 526 ILCTA 530
>UniRef50_Q14VU5 Cluster: ORF13; n=1; Ranid herpesvirus 1|Rep: ORF13 -
Ranid herpesvirus 1 (Lucke tumor herpesvirus)
Length = 3149
Score = 32.7 bits (71), Expect = 6.7
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +1
Query: 7 YKT*IHP-FNRKMSTAEHRSPQKTSKTTGFAPP--ASSEFPQPSP 132
Y T P + + AEHR+P + T FA P A+ FPQP+P
Sbjct: 1786 YPTQSEPQYTQLYGQAEHRAPNTAAYTDPFAAPQSAAPSFPQPAP 1830
>UniRef50_Q89EV2 Cluster: Blr6968 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr6968 protein - Bradyrhizobium
japonicum
Length = 480
Score = 32.3 bits (70), Expect = 8.9
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -1
Query: 239 DPQRIKLTAYGFSNGYHVPEDVAWVDHQVHKVDRRSGEGCGNSLDAGGAKPVVLEVFWG 63
DP I + YG SN + V + A+VD + ++ G G + AGG ++ WG
Sbjct: 330 DPINIAVAGYG-SNVHSVQTNDAYVDQSIVQIAGIGGHGGNGNAAAGGHASLLSHGLWG 387
>UniRef50_Q2W0U5 Cluster: Putative uncharacterized protein; n=2;
Magnetospirillum|Rep: Putative uncharacterized protein -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 382
Score = 32.3 bits (70), Expect = 8.9
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +1
Query: 31 NRKMSTAEHRSPQKTSKTTGFAPPASSEFPQPSPDRRSTLWTWWSTQATSS 183
+R+M A P +T PPA +E P P RR L + + T S
Sbjct: 153 DRRMQAARDEGPNAPPRTAPGGPPARAEVPDTVPTRRGLLAEHFQKRLTES 203
>UniRef50_Q5KNJ2 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 923
Score = 32.3 bits (70), Expect = 8.9
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 22 HPFNRKMSTAEHRSPQKTSKTTGFAPPASSEFPQPSPDR 138
HP + + RSP ++ APPAS + P PSP R
Sbjct: 10 HP-SASADSRTRRSPSSSTLADNDAPPASQQAPSPSPQR 47
>UniRef50_A6R297 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 288
Score = 32.3 bits (70), Expect = 8.9
Identities = 14/50 (28%), Positives = 21/50 (42%)
Frame = +1
Query: 7 YKT*IHPFNRKMSTAEHRSPQKTSKTTGFAPPASSEFPQPSPDRRSTLWT 156
Y + P + K+ HR G+ PP + P+ + RRS WT
Sbjct: 87 YSPDVSPTDMKLGFGSHRKALALLGAAGYPPPYFPDIPRETQHRRSPSWT 136
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,225,287
Number of Sequences: 1657284
Number of extensions: 11267085
Number of successful extensions: 36650
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 34639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36539
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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