Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_E12
         (545 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    25   0.57 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    25   0.57 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    23   2.3  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    23   2.3  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   2.3  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   5.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.3  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   5.3  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   5.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.0  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 24.6 bits (51), Expect = 0.57
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 207 CRNTPIGIWRQVFKLEGG 260
           C+NTPIGI  ++  + GG
Sbjct: 206 CQNTPIGILGRIKGISGG 223


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 24.6 bits (51), Expect = 0.57
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 207 CRNTPIGIWRQVFKLEGG 260
           C+NTPIGI  ++  + GG
Sbjct: 206 CQNTPIGILGRIKGISGG 223


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 86  FSITRYRLSAFDHNFT*WLSHDVVQ 160
           FSI +  L+ FD++ T  ++HD  Q
Sbjct: 60  FSINQPYLNHFDNSVTPMVNHDFTQ 84


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 86  FSITRYRLSAFDHNFT*WLSHDVVQ 160
           FSI +  L+ FD++ T  ++HD  Q
Sbjct: 60  FSINQPYLNHFDNSVTPMVNHDFTQ 84


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 86  FSITRYRLSAFDHNFT*WLSHDVVQ 160
           FSI +  L+ FD++ T  ++HD  Q
Sbjct: 60  FSINQPYLNHFDNSVTPMVNHDFTQ 84


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 7/25 (28%), Positives = 17/25 (68%)
 Frame = +2

Query: 89  SITRYRLSAFDHNFT*WLSHDVVQD 163
           S+TR+++S+  H+    + HD++ +
Sbjct: 350 SLTRHQISSMGHSHAHPMHHDMLPE 374


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = +1

Query: 352 LESDRWGSHLRRLTRNSVVXIRCAIIASHHRLIVFK*LYLETFYLAFSSLACIFDHI 522
           L ++ +G  L  L  NS + I  A+  +   L   +  +    Y+A +S+  IFD I
Sbjct: 239 LFNEVFGVSLLVLFGNSFLSIVLALFRTAAELQASQIKWTRIAYMALASVPFIFDSI 295


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = +1

Query: 352 LESDRWGSHLRRLTRNSVVXIRCAIIASHHRLIVFK*LYLETFYLAFSSLACIFDHI 522
           L ++ +G  L  L  NS + I  A+  +   L   +  +    Y+A +S+  IFD I
Sbjct: 257 LFNEVFGVSLLVLFGNSFLSIVLALFRTAAELQASQIKWTRIAYMALASVPFIFDSI 313


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 7/25 (28%), Positives = 17/25 (68%)
 Frame = +2

Query: 89  SITRYRLSAFDHNFT*WLSHDVVQD 163
           S+TR+++S+  H+    + HD++ +
Sbjct: 350 SLTRHQISSMGHSHAHPMHHDMLPE 374


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 19  VFL**KINKFSIENLLLVVASFLFY 93
           VF+  KINK     LLL + ++L +
Sbjct: 222 VFMCKKINKLYGHQLLLTILTYLIW 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,604
Number of Sequences: 336
Number of extensions: 2889
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)