Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_E12
         (545 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    27   0.16 
AB264332-1|BAF44087.1|   58|Apis mellifera ecdysone-induced prot...    23   2.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.7  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    22   3.5  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    22   3.5  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    22   3.5  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   8.2  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    21   8.2  

>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 26.6 bits (56), Expect = 0.16
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = -1

Query: 374 DPHLSDSKIGLSFR*SKKSCGNHCMVVGHFLMMPAWVATTLKFENLSPNSNRC 216
           D H +  +I      S     NH   +G+   +  WV   LK ++L+   N C
Sbjct: 81  DRHSTTREIAEKLHVSHTCIENHLKQLGYVQKLDTWVPHELKEKHLTQRINSC 133


>AB264332-1|BAF44087.1|   58|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 58

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 139 PSGEIVVKSTEPITCNRKEKRPQ 71
           PSG+I+  S+EP+  N KE+  Q
Sbjct: 18  PSGDILSPSSEPLD-NDKEQSAQ 39


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 139 PSGEIVVKSTEPITCNRKEKRPQ 71
           PSG+I+  S+EP+  N KE+  Q
Sbjct: 18  PSGDILSPSSEPLD-NDKEQSAQ 39


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 277 IIRKCPTTMQWFPQD 321
           I   CP  +Q+FP D
Sbjct: 134 ITASCPMNLQYFPMD 148


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 277 IIRKCPTTMQWFPQD 321
           I   CP  +Q+FP D
Sbjct: 134 ITASCPMNLQYFPMD 148


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 277 IIRKCPTTMQWFPQD 321
           I   CP  +Q+FP D
Sbjct: 73  ITASCPMNLQYFPMD 87


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase
          domain protein protein.
          Length = 448

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +2

Query: 5  YDNCLFFCN 31
          YDNC+  CN
Sbjct: 52 YDNCITVCN 60


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 538 SDVKWKCDRR 509
           +D+K KCDRR
Sbjct: 373 ADIKEKCDRR 382


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,067
Number of Sequences: 438
Number of extensions: 3460
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)