Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_E09
         (497 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064950-1|AAH64950.1|  282|Homo sapiens FAM134A protein protein.      32   1.3  
AK074983-1|BAC11332.1|  543|Homo sapiens protein ( Homo sapiens ...    32   1.3  
M96982-1|AAA36619.1|  240|Homo sapiens U2 snRNP auxiliary factor...    31   1.7  
BC005915-1|AAH05915.1|  167|Homo sapiens U2 small nuclear RNA au...    31   1.7  
BC001923-1|AAH01923.1|  240|Homo sapiens U2 small nuclear RNA au...    31   1.7  
BC001177-1|AAH01177.1|  240|Homo sapiens U2 small nuclear RNA au...    31   1.7  
AP001748-2|BAA95534.1|  240|Homo sapiens U2 snRNP auxiliary fact...    31   1.7  
AJ627978-1|CAF29556.1|  240|Homo sapiens U2 snRNP auxiliary fact...    31   1.7  
X87248-1|CAA60698.1|  341|Homo sapiens HP8 peptide protein.            30   3.9  
BC111856-1|AAI11857.1|  144|Homo sapiens Unknown (protein for IM...    30   3.9  
AB051549-1|BAB21853.1| 1460|Homo sapiens KIAA1762 protein protein.     29   6.8  

>BC064950-1|AAH64950.1|  282|Homo sapiens FAM134A protein protein.
          Length = 282

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +1

Query: 124 SGGAPALPGRASPPICMCACVPLFASRPSV 213
           SGG  ALPG  SPP+C+    P  A  PS+
Sbjct: 178 SGGLTALPGTLSPPLCLVGSDP--APSPSI 205


>AK074983-1|BAC11332.1|  543|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90502 fis, clone NT2RP3004075. ).
          Length = 543

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +1

Query: 124 SGGAPALPGRASPPICMCACVPLFASRPSV 213
           SGG  ALPG  SPP+C+    P  A  PS+
Sbjct: 439 SGGLTALPGTLSPPLCLVGSDP--APSPSI 466


>M96982-1|AAA36619.1|  240|Homo sapiens U2 snRNP auxiliary factor
           small subunit protein.
          Length = 240

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = -3

Query: 285 FINISYLKKIYIKMYRK--GADASTAYTRARRKQRHARTHTDRGRSPAGEGGG 133
           F N  +LK I  ++ R+  G       +R+R ++R +R+  DRGR   G GGG
Sbjct: 168 FCNFMHLKPISRELRRELYGRRRKKHRSRSRSRERRSRSR-DRGRGGGGGGGG 219


>BC005915-1|AAH05915.1|  167|Homo sapiens U2 small nuclear RNA
           auxiliary factor 1 protein.
          Length = 167

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = -3

Query: 285 FINISYLKKIYIKMYRK--GADASTAYTRARRKQRHARTHTDRGRSPAGEGGG 133
           F N  +LK I  ++ R+  G       +R+R ++R +R+  DRGR   G GGG
Sbjct: 95  FCNFMHLKPISRELRRELYGRRRKKHRSRSRSRERRSRSR-DRGRGGGGGGGG 146


>BC001923-1|AAH01923.1|  240|Homo sapiens U2 small nuclear RNA
           auxiliary factor 1 protein.
          Length = 240

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = -3

Query: 285 FINISYLKKIYIKMYRK--GADASTAYTRARRKQRHARTHTDRGRSPAGEGGG 133
           F N  +LK I  ++ R+  G       +R+R ++R +R+  DRGR   G GGG
Sbjct: 168 FCNFMHLKPISRELRRELYGRRRKKHRSRSRSRERRSRSR-DRGRGGGGGGGG 219


>BC001177-1|AAH01177.1|  240|Homo sapiens U2 small nuclear RNA
           auxiliary factor 1 protein.
          Length = 240

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = -3

Query: 285 FINISYLKKIYIKMYRK--GADASTAYTRARRKQRHARTHTDRGRSPAGEGGG 133
           F N  +LK I  ++ R+  G       +R+R ++R +R+  DRGR   G GGG
Sbjct: 168 FCNFMHLKPISRELRRELYGRRRKKHRSRSRSRERRSRSR-DRGRGGGGGGGG 219


>AP001748-2|BAA95534.1|  240|Homo sapiens U2 snRNP auxiliary factor
           small subunit protein.
          Length = 240

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = -3

Query: 285 FINISYLKKIYIKMYRK--GADASTAYTRARRKQRHARTHTDRGRSPAGEGGG 133
           F N  +LK I  ++ R+  G       +R+R ++R +R+  DRGR   G GGG
Sbjct: 168 FCNFMHLKPISRELRRELYGRRRKKHRSRSRSRERRSRSR-DRGRGGGGGGGG 219


>AJ627978-1|CAF29556.1|  240|Homo sapiens U2 snRNP auxiliary factor
           small subunit protein.
          Length = 240

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = -3

Query: 285 FINISYLKKIYIKMYRK--GADASTAYTRARRKQRHARTHTDRGRSPAGEGGG 133
           F N  +LK I  ++ R+  G       +R+R ++R +R+  DRGR   G GGG
Sbjct: 168 FCNFMHLKPISRELRRELYGRRRKKHRSRSRSRERRSRSR-DRGRGGGGGGGG 219


>X87248-1|CAA60698.1|  341|Homo sapiens HP8 peptide protein.
          Length = 341

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 17/38 (44%), Positives = 19/38 (50%)
 Frame = -3

Query: 240 RKGADASTAYTRARRKQRHARTHTDRGRSPAGEGGGAA 127
           R  A A+T  TRAR + R  RT     R P G G  AA
Sbjct: 86  RAAAAAATLTTRARPRARRRRTARGSARPPPGYGCAAA 123


>BC111856-1|AAI11857.1|  144|Homo sapiens Unknown (protein for
           IMAGE:5174787) protein.
          Length = 144

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +1

Query: 127 GGAPALPGRASPPICMCACVPLFASRPSV 213
           GG  ALPG  SPP+C+    P  A  PS+
Sbjct: 41  GGLTALPGTLSPPLCLVGSDP--APSPSI 67


>AB051549-1|BAB21853.1| 1460|Homo sapiens KIAA1762 protein protein.
          Length = 1460

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = +1

Query: 55   RCASQCDGITLVSAHNLYLCIFQSGGAPALPGRASPPICMCACV 186
            +C    DG    +AH    C F  G   ++P     PIC   C+
Sbjct: 1343 QCKMAFDGEAPATAHQRSFCFFGRGSGGSMPPPLRVPICTYHCL 1386


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,193,734
Number of Sequences: 237096
Number of extensions: 1310002
Number of successful extensions: 3964
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3963
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)