Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_E06
(604 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 26 0.21
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 25 0.49
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 25 0.49
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 25 0.49
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 25 0.49
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 25 0.49
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 25 0.49
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 25 0.49
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 25 0.49
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 24 0.86
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 24 0.86
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 24 0.86
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 24 0.86
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 22 4.6
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 4.6
DQ855490-1|ABH88177.1| 133|Tribolium castaneum chemosensory pro... 21 6.1
AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory recept... 21 8.0
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 26.2 bits (55), Expect = 0.21
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = -2
Query: 513 SCSFADCRTWATVCSPSGTSSVLRAARAT--MDVGSASRITPLSHISSKTSITASRLSKS 340
SC +AD + V SP S+ R+T + S S T S ++S S++ S K
Sbjct: 98 SCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKP 157
Query: 339 IRLSTFLRRSILTDS*SALST 277
+T S S S+ S+
Sbjct: 158 ATSTTSQNLSSPASSTSSTSS 178
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.49
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -2
Query: 513 SCSFADCRTWATVCSPSGTSSVLRAARAT--MDVGSASRITPLSHISSKTSITAS 355
SC +AD + V SP S+ R+T + S S T S ++S S++ S
Sbjct: 98 SCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 152
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 25.0 bits (52), Expect = 0.49
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -2
Query: 513 SCSFADCRTWATVCSPSGTSSVLRAARAT--MDVGSASRITPLSHISSKTSITAS 355
SC +AD + V SP S+ R+T + S S T S ++S S++ S
Sbjct: 98 SCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 152
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.49
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -2
Query: 513 SCSFADCRTWATVCSPSGTSSVLRAARAT--MDVGSASRITPLSHISSKTSITAS 355
SC +AD + V SP S+ R+T + S S T S ++S S++ S
Sbjct: 98 SCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 152
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 25.0 bits (52), Expect = 0.49
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -2
Query: 513 SCSFADCRTWATVCSPSGTSSVLRAARAT--MDVGSASRITPLSHISSKTSITAS 355
SC +AD + V SP S+ R+T + S S T S ++S S++ S
Sbjct: 98 SCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 152
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 25.0 bits (52), Expect = 0.49
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -2
Query: 513 SCSFADCRTWATVCSPSGTSSVLRAARAT--MDVGSASRITPLSHISSKTSITAS 355
SC +AD + V SP S+ R+T + S S T S ++S S++ S
Sbjct: 54 SCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 108
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.49
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -2
Query: 513 SCSFADCRTWATVCSPSGTSSVLRAARAT--MDVGSASRITPLSHISSKTSITAS 355
SC +AD + V SP S+ R+T + S S T S ++S S++ S
Sbjct: 98 SCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 152
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 25.0 bits (52), Expect = 0.49
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -2
Query: 513 SCSFADCRTWATVCSPSGTSSVLRAARAT--MDVGSASRITPLSHISSKTSITAS 355
SC +AD + V SP S+ R+T + S S T S ++S S++ S
Sbjct: 98 SCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 152
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 25.0 bits (52), Expect = 0.49
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -2
Query: 513 SCSFADCRTWATVCSPSGTSSVLRAARAT--MDVGSASRITPLSHISSKTSITAS 355
SC +AD + V SP S+ R+T + S S T S ++S S++ S
Sbjct: 98 SCKYADSTSSTGVASPQDLSTNGAPPRSTPPLSTPSNSNATKSSGLTSPLSVSTS 152
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 24.2 bits (50), Expect = 0.86
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 139 LFKCLLFFSCGQHILIVILGEYSITF 62
++KCLLFF IL+V GE + F
Sbjct: 304 VWKCLLFFVSVLFILLVKEGEVAFFF 329
Score = 21.0 bits (42), Expect = 8.0
Identities = 9/29 (31%), Positives = 12/29 (41%)
Frame = -3
Query: 89 NTWRVFYYLHYPRCTFPLLCTLLVQKVSL 3
+ W FYY P F L+C + L
Sbjct: 942 DNWTSFYYNIIPILFFMLVCFTCKSNIQL 970
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 24.2 bits (50), Expect = 0.86
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 139 LFKCLLFFSCGQHILIVILGEYSITF 62
++KCLLFF IL+V GE + F
Sbjct: 304 VWKCLLFFVSVLFILLVKEGEVAFFF 329
Score = 21.0 bits (42), Expect = 8.0
Identities = 9/29 (31%), Positives = 12/29 (41%)
Frame = -3
Query: 89 NTWRVFYYLHYPRCTFPLLCTLLVQKVSL 3
+ W FYY P F L+C + L
Sbjct: 942 DNWTSFYYNIIPILFFMLVCFTCKSNIQL 970
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 24.2 bits (50), Expect = 0.86
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 139 LFKCLLFFSCGQHILIVILGEYSITF 62
++KCLLFF IL+V GE + F
Sbjct: 304 VWKCLLFFVSVLFILLVKEGEVAFFF 329
Score = 21.0 bits (42), Expect = 8.0
Identities = 9/29 (31%), Positives = 12/29 (41%)
Frame = -3
Query: 89 NTWRVFYYLHYPRCTFPLLCTLLVQKVSL 3
+ W FYY P F L+C + L
Sbjct: 942 DNWTSFYYNIIPILFFMLVCFTCKSNIQL 970
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 24.2 bits (50), Expect = 0.86
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 139 LFKCLLFFSCGQHILIVILGEYSITF 62
++KCLLFF IL+V GE + F
Sbjct: 304 VWKCLLFFVSVLFILLVKEGEVAFFF 329
Score = 21.0 bits (42), Expect = 8.0
Identities = 9/29 (31%), Positives = 12/29 (41%)
Frame = -3
Query: 89 NTWRVFYYLHYPRCTFPLLCTLLVQKVSL 3
+ W FYY P F L+C + L
Sbjct: 942 DNWTSFYYNIIPILFFMLVCFTCKSNIQL 970
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 21.8 bits (44), Expect = 4.6
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -1
Query: 478 SLFT*WHVFSPKGSSSYYGCWIRIQN 401
SL+T W F+ K YG + I++
Sbjct: 229 SLYTCWSEFTQKTQGQIYGIKVDIRD 254
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.8 bits (44), Expect = 4.6
Identities = 7/21 (33%), Positives = 15/21 (71%)
Frame = +2
Query: 239 IGSSHENELILQSVLNALYES 301
+GS H ++ +++V+N YE+
Sbjct: 107 VGSVHSRDVNVRAVVNQYYEA 127
>DQ855490-1|ABH88177.1| 133|Tribolium castaneum chemosensory
protein 4 protein.
Length = 133
Score = 21.4 bits (43), Expect = 6.1
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = -2
Query: 537 NYFSNDHFSCSFADCRTWATVCSPSG 460
N N+ S+ DC CSP G
Sbjct: 37 NVVKNERLLKSYVDCLLEKGRCSPDG 62
>AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory receptor
candidate 60 protein.
Length = 364
Score = 21.0 bits (42), Expect = 8.0
Identities = 7/24 (29%), Positives = 11/24 (45%)
Frame = -1
Query: 181 YYLCICSVSLIEQILFKCLLFFSC 110
YY C ++ I +C+L C
Sbjct: 312 YYSTTCDIATILDFWVRCVLSLHC 335
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,426
Number of Sequences: 336
Number of extensions: 3047
Number of successful extensions: 24
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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