Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_E06
(604 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0646 + 12606569-12606582,12608702-12608750,12609387-126095... 133 9e-32
05_05_0116 - 22496535-22496576,22496974-22497058,22497468-224975... 118 4e-27
01_06_1282 + 35972234-35972244,35972451-35972522,35972714-359727... 117 6e-27
10_06_0127 - 11027692-11027826,11027925-11027993,11029925-110300... 39 0.004
03_02_0244 + 6750973-6751041,6751216-6751258,6751349-6751410,675... 30 1.6
05_04_0288 + 19839597-19839821,19841882-19842107,19842494-198425... 29 2.1
01_02_0050 + 10649275-10649655,10649807-10649921,10651003-106510... 29 2.8
06_03_1158 - 28080330-28080647,28080726-28080949,28081213-280814... 29 3.7
07_03_1078 - 23789205-23790608,23791155-23791529,23791703-23791792 28 6.5
01_01_1088 - 8554503-8554865,8554964-8554993,8555187-8555247,855... 28 6.5
11_01_0061 - 456521-457389,457534-457659,458377-459307,459564-45... 27 8.7
02_01_0777 - 5785295-5787370,5787723-5788769 27 8.7
>02_02_0646 +
12606569-12606582,12608702-12608750,12609387-12609546,
12610372-12610519,12610610-12610687,12611935-12612019,
12612098-12612157
Length = 197
Score = 133 bits (322), Expect = 9e-32
Identities = 72/172 (41%), Positives = 102/172 (59%), Gaps = 6/172 (3%)
Frame = +2
Query: 35 IKGMCILDNEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANA----EIIMLDGLTS 202
+K + +LD+EG R+ KY+ D + + AFEK++F KT + NA EI + DG
Sbjct: 27 VKNILLLDSEGKRVAVKYFSDD-WSSNASKLAFEKSVFTKTLKTNARSEAEITLFDGYIV 85
Query: 203 VYKSNVDLFFYVIGSSHENELILQSVLNALYESVSMLLRRNVERRILFDNLDAVMLVFDE 382
VYK DL F+V ENELI+ +VL +SV +LLR +VE+R +NLD ++L DE
Sbjct: 86 VYKFVQDLHFFVTAGDDENELIIANVLQGFSDSVGLLLRGDVEKRTALENLDLILLCIDE 145
Query: 383 ICDRGVILDADPTSIVARAALRTED--VPLGEQTVAQVLQSAKEQLKWSLLK 532
I D G+IL+ D +I + A D P EQT++Q L +A+E L SLLK
Sbjct: 146 IVDGGIILETDANTIAGKVATNAVDGSAPFSEQTISQALATAREHLARSLLK 197
>05_05_0116 -
22496535-22496576,22496974-22497058,22497468-22497545,
22497656-22497803,22498612-22498771,22499056-22499058
Length = 171
Score = 118 bits (284), Expect = 4e-27
Identities = 60/140 (42%), Positives = 87/140 (62%), Gaps = 4/140 (2%)
Frame = +2
Query: 35 IKGMCILDNEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANA----EIIMLDGLTS 202
+K + +LD+EG R+ KYY D PT + AFEK++F KT +A A EI+M DG
Sbjct: 7 VKNILLLDSEGKRVAVKYYTDD-WPTLSAKLAFEKSVFVKTQKATAGAEAEIVMFDGHIV 65
Query: 203 VYKSNVDLFFYVIGSSHENELILQSVLNALYESVSMLLRRNVERRILFDNLDAVMLVFDE 382
VYK DL F+V G ENELIL SVL ++V ++LR NV++R +NLD ++L DE
Sbjct: 66 VYKFIQDLHFFVTGGEEENELILASVLQGFTDAVDIILRNNVDKRTALENLDLILLCLDE 125
Query: 383 ICDRGVILDADPTSIVARAA 442
I D G++L+ + + I + +
Sbjct: 126 IVDGGIVLETEGSVIAEKVS 145
>01_06_1282 +
35972234-35972244,35972451-35972522,35972714-35972747,
35973247-35973360,35974833-35975036,35975290-35975449,
35976093-35976240,35976345-35976422,35976854-35976938,
35977142-35977213
Length = 325
Score = 117 bits (282), Expect = 6e-27
Identities = 59/140 (42%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Frame = +2
Query: 35 IKGMCILDNEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTH----RANAEIIMLDGLTS 202
+K + +LD+EG R+ KYY D P+ ++AFEK++F KT R AEI+M D
Sbjct: 151 VKNILVLDSEGKRVAVKYYSDD-WPSLSSKQAFEKSVFAKTQKTSARTEAEIVMFDSYFV 209
Query: 203 VYKSNVDLFFYVIGSSHENELILQSVLNALYESVSMLLRRNVERRILFDNLDAVMLVFDE 382
VYK DL F+V G ENELIL SVL E++ LLR V RR +NLD + L DE
Sbjct: 210 VYKFIQDLHFFVTGGDEENELILASVLQGFSEAIDYLLRNKVHRRAALENLDLIFLCLDE 269
Query: 383 ICDRGVILDADPTSIVARAA 442
+ D G++L+ D +I+ + +
Sbjct: 270 VVDGGIVLETDAKAILEKVS 289
>10_06_0127 -
11027692-11027826,11027925-11027993,11029925-11030011,
11030146-11030286
Length = 143
Score = 38.7 bits (86), Expect = 0.004
Identities = 32/136 (23%), Positives = 66/136 (48%), Gaps = 3/136 (2%)
Frame = +2
Query: 35 IKGMCILDNEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKT-HRANAEIIMLD--GLTSV 205
I+ + +++ +G +A+YY+ + E++A E + K R + + ++ V
Sbjct: 3 IRFVVMVNKQGQTRVAQYYEH---LSVDERRALEGEIVRKCLARTDHQCSFVEHRNYKVV 59
Query: 206 YKSNVDLFFYVIGSSHENELILQSVLNALYESVSMLLRRNVERRILFDNLDAVMLVFDEI 385
Y+ LFF V + ENEL + ++ L E++ E I+F +L+ V + +E+
Sbjct: 60 YRRYASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMF-HLEKVHFMLEEM 118
Query: 386 CDRGVILDADPTSIVA 433
G I++ +I+A
Sbjct: 119 VMNGCIVETSKQNILA 134
>03_02_0244 +
6750973-6751041,6751216-6751258,6751349-6751410,
6751779-6751875,6752380-6752450,6752503-6752586,
6753040-6753294
Length = 226
Score = 29.9 bits (64), Expect = 1.6
Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 7/113 (6%)
Frame = +2
Query: 32 IIKGMCILDNEGNRILAKYYDKDVLPTTKEQKAFEK--NLFNKTHRANAEIIMLD----- 190
+I+ + ++ +G L K+Y P K Q L + + + + +D
Sbjct: 1 MIQAVMVMSTQGKPRLLKFYSYQ--PPEKHQDLVRGVFQLLSARPDSVSNFVKVDAIFGP 58
Query: 191 GLTSVYKSNVDLFFYVIGSSHENELILQSVLNALYESVSMLLRRNVERRILFD 349
G VYK L+F + S ENEL + ++ E++ + E I+F+
Sbjct: 59 GAKLVYKHLATLYFVFVFDSSENELAVLDLVQVFVETLDRCFKNVCELDIVFN 111
>05_04_0288 +
19839597-19839821,19841882-19842107,19842494-19842582,
19845184-19845387,19845463-19845717,19845796-19846011,
19846611-19846766,19846880-19847039,19847702-19847788,
19847789-19847940,19848006-19848143,19848714-19848788,
19849166-19849444
Length = 753
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Frame = +2
Query: 245 SSHENELILQSV--LNALYESVSMLLRRNVERRILFDNLDAV 364
+S EL+L+ + L +Y+SV M + + ERRIL D +D+V
Sbjct: 470 ASKMKELVLKKMIELEEIYKSVHMDIDSDYERRILNDLIDSV 511
>01_02_0050 +
10649275-10649655,10649807-10649921,10651003-10651009,
10651035-10651216,10651318-10651530,10651621-10651688,
10651772-10651846,10651961-10652068,10652413-10652530,
10652652-10652793,10653084-10653140,10653281-10653701,
10654064-10654528
Length = 783
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 69 IEYSPSITIRMCCPQLKNRRHLKRICSIR 155
I P ++ R C P+L R HL R S R
Sbjct: 712 ISTKPPLSCRQCLPELAYRHHLNRFLSTR 740
>06_03_1158 -
28080330-28080647,28080726-28080949,28081213-28081423,
28081536-28081708,28082093-28082156,28082353-28082514
Length = 383
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 296 ESVSMLLRRNVERRILFDNLDAVMLVFDEICDRGVILDAD-PTSIVARAAL 445
E V +L+RR R L D +M+ D+IC R L AD IV R L
Sbjct: 207 EDVDLLIRR--AERCLEAGADMIMIDADDICQRADSLRADIVAKIVGRLGL 255
>07_03_1078 - 23789205-23790608,23791155-23791529,23791703-23791792
Length = 622
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 451 SPKGSSSYYGCWIRIQNNSSVAYFVENQHHS 359
+PKGSS Y C + I S++ EN+ S
Sbjct: 347 NPKGSSCSYSCQVEIPVVESISPLTENESES 377
>01_01_1088 -
8554503-8554865,8554964-8554993,8555187-8555247,
8556313-8556341
Length = 160
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -2
Query: 534 YFSNDHFSCSFADCRTWATVCSPSGTSSVLRA-ARATMDVGSASRITPL 391
+FSN + S T CS S +LR +T DV +A++I L
Sbjct: 70 HFSNKYVSAQVVHTPTATVACSASSQEKLLRPNMESTRDVAAAAKIGKL 118
>11_01_0061 - 456521-457389,457534-457659,458377-459307,459564-459581,
459924-460183,461834-461918,462587-462919,463053-463137,
463289-463374,463455-463556,463656-463795,464332-464658,
464778-465389,465502-465586,465587-465682,465762-466115,
466212-466322,466426-466509,467086-467164,467742-467899,
468034-468150,468240-468398,468475-468557,469098-469200,
470784-471080
Length = 1899
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 356 DAVMLVFDEICDRGVILDADPTSIVARAALRTEDV 460
D+V VFDE+ RG++ D D S+ A R D+
Sbjct: 1468 DSVEEVFDEMLLRGLVPDVDVYSVYISALCRKGDL 1502
>02_01_0777 - 5785295-5787370,5787723-5788769
Length = 1040
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +2
Query: 89 YDKDVLPTTKEQKAFEKNLFNKTHRANAE-IIMLDGLTSVYKSNVD--LFFYVIGSSHEN 259
+D++V P+ K Q++FE L HR N + I + GL + + D + ++GS+ N
Sbjct: 771 FDQNVTPSPKPQQSFELILHKILHRDNKDNIEAIQGLLPLAERANDSRVQDLLLGSNMSN 830
Query: 260 ELIL 271
L L
Sbjct: 831 GLAL 834
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,401,717
Number of Sequences: 37544
Number of extensions: 283583
Number of successful extensions: 898
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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