Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_E06
(604 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g60970.1 68414.m06863 clathrin adaptor complex small chain fa... 151 3e-37
At3g09800.1 68416.m01165 clathrin adaptor complex small chain fa... 140 5e-34
At4g08520.1 68417.m01403 clathrin adaptor complex small chain fa... 133 7e-32
At3g09800.2 68416.m01166 clathrin adaptor complex small chain fa... 109 1e-24
At3g50860.1 68416.m05569 clathrin adaptor complex small chain fa... 47 8e-06
At2g19790.1 68415.m02312 clathrin adaptor complex small chain fa... 40 0.002
At1g52620.1 68414.m05941 pentatricopeptide (PPR) repeat-containi... 29 1.8
At2g15240.1 68415.m01738 UNC-50 family protein contains Pfam pro... 28 4.1
At1g80850.1 68414.m09485 methyladenine glycosylase family protei... 28 4.1
At5g06670.1 68418.m00753 kinesin motor protein-related 28 5.5
At4g18180.1 68417.m02701 glycoside hydrolase family 28 protein /... 28 5.5
At2g22630.1 68415.m02682 MADS-box protein (AGL17) nearly identic... 28 5.5
At1g10385.1 68414.m01170 hypothetical protein 27 7.2
At1g07490.1 68414.m00802 expressed protein 27 7.2
At4g38240.2 68417.m05401 alpha-1,3-mannosyl-glycoprotein beta-1,... 27 9.6
At4g38240.1 68417.m05400 alpha-1,3-mannosyl-glycoprotein beta-1,... 27 9.6
At4g35410.2 68417.m05030 clathrin adaptor complex small chain fa... 27 9.6
At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP1... 27 9.6
At3g13030.1 68416.m01623 hAT dimerisation domain-containing prot... 27 9.6
At1g20030.2 68414.m02508 pathogenesis-related thaumatin family p... 27 9.6
At1g20030.1 68414.m02509 pathogenesis-related thaumatin family p... 27 9.6
At1g14460.1 68414.m01715 DNA polymerase-related weak similarity ... 27 9.6
>At1g60970.1 68414.m06863 clathrin adaptor complex small chain
family protein contains Pfam profile: PF01217 clathrin
adaptor complex small chain
Length = 177
Score = 151 bits (366), Expect = 3e-37
Identities = 78/172 (45%), Positives = 109/172 (63%), Gaps = 6/172 (3%)
Frame = +2
Query: 35 IKGMCILDNEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANA----EIIMLDGLTS 202
+K + +LD+EG R+ KYY D PT Q+AFEK++F KT + NA E+ L+
Sbjct: 7 VKNILLLDSEGKRVAVKYYSDD-WPTNSAQEAFEKSVFTKTQKTNARTEVEVTALENNIV 65
Query: 203 VYKSNVDLFFYVIGSSHENELILQSVLNALYESVSMLLRRNVERRILFDNLDAVMLVFDE 382
VYK DL F+V G ENELIL SVL L+++V++LLR NV++R DNLD + L FDE
Sbjct: 66 VYKFVQDLHFFVTGGEEENELILASVLEGLFDAVTLLLRSNVDKREALDNLDLIFLSFDE 125
Query: 383 ICDRGVILDADPTSIVARAALRTED--VPLGEQTVAQVLQSAKEQLKWSLLK 532
I D G++L+ D I +A + + D PL EQT++Q L +A+E L SL+K
Sbjct: 126 IIDGGIVLETDANVIAGKAGINSTDPNAPLSEQTISQALATAREHLTRSLMK 177
>At3g09800.1 68416.m01165 clathrin adaptor complex small chain
family protein contains Pfam profile: PF01217 clathrin
adaptor complex small chain
Length = 179
Score = 140 bits (340), Expect = 5e-34
Identities = 74/172 (43%), Positives = 108/172 (62%), Gaps = 6/172 (3%)
Frame = +2
Query: 32 IIKGMCILDNEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANA----EIIMLDGLT 199
++K + +LD+EG R+ KYY D PT + +FEK +F+KT + NA EI +LD
Sbjct: 8 LVKNILLLDSEGKRVAVKYYSDD-WPTNAAKLSFEKYVFSKTSKTNARTEAEITLLDSNI 66
Query: 200 SVYKSNVDLFFYVIGSSHENELILQSVLNALYESVSMLLRRNVERRILFDNLDAVMLVFD 379
VYK DL F+V G +ENELIL SVL +++V++LLR NVE+ +NLD + L D
Sbjct: 67 IVYKFAQDLHFFVTGGENENELILASVLQGFFDAVALLLRSNVEKMEALENLDLIFLCLD 126
Query: 380 EICDRGVILDADPTSIVARAALRTEDV--PLGEQTVAQVLQSAKEQLKWSLL 529
E+ D+GV+L+ DP I + A+++ + L EQT+ Q L +A+E L SLL
Sbjct: 127 EMVDQGVVLETDPNVIAGKVAMQSTEASGSLSEQTLTQALATAREHLARSLL 178
>At4g08520.1 68417.m01403 clathrin adaptor complex small chain
family protein contains Pfam profile: PF01217 clathrin
adaptor complex small chain
Length = 181
Score = 133 bits (322), Expect = 7e-32
Identities = 70/172 (40%), Positives = 106/172 (61%), Gaps = 6/172 (3%)
Frame = +2
Query: 32 IIKGMCILDNEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANA----EIIMLDGLT 199
++K + +LD+EG R+ KYY D T + AFEK +F+KT + NA EI +L+
Sbjct: 10 LVKNILLLDSEGKRVAVKYYSDD-WATNASKLAFEKYVFSKTSKTNARTEAEITLLESNI 68
Query: 200 SVYKSNVDLFFYVIGSSHENELILQSVLNALYESVSMLLRRNVERRILFDNLDAVMLVFD 379
VYK DL F+V G +ENEL+L SVL +++V++LLR NVE+ +NLD + L D
Sbjct: 69 VVYKFAQDLHFFVTGGENENELVLSSVLQGFFDAVALLLRNNVEKMEALENLDLIFLCLD 128
Query: 380 EICDRGVILDADPTSIVARAALRTEDV--PLGEQTVAQVLQSAKEQLKWSLL 529
E+ D+G++L+ D I + A+++ + L EQT+ Q L +A+E L SLL
Sbjct: 129 EMVDQGMVLETDANVIAGKVAMQSAEASGSLSEQTLTQALATAREHLARSLL 180
>At3g09800.2 68416.m01166 clathrin adaptor complex small chain
family protein contains Pfam profile: PF01217 clathrin
adaptor complex small chain
Length = 138
Score = 109 bits (263), Expect = 1e-24
Identities = 56/126 (44%), Positives = 80/126 (63%), Gaps = 4/126 (3%)
Frame = +2
Query: 32 IIKGMCILDNEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANA----EIIMLDGLT 199
++K + +LD+EG R+ KYY D PT + +FEK +F+KT + NA EI +LD
Sbjct: 8 LVKNILLLDSEGKRVAVKYYSDD-WPTNAAKLSFEKYVFSKTSKTNARTEAEITLLDSNI 66
Query: 200 SVYKSNVDLFFYVIGSSHENELILQSVLNALYESVSMLLRRNVERRILFDNLDAVMLVFD 379
VYK DL F+V G +ENELIL SVL +++V++LLR NVE+ +NLD + L D
Sbjct: 67 IVYKFAQDLHFFVTGGENENELILASVLQGFFDAVALLLRSNVEKMEALENLDLIFLCLD 126
Query: 380 EICDRG 397
E+ D+G
Sbjct: 127 EMVDQG 132
>At3g50860.1 68416.m05569 clathrin adaptor complex small chain
family protein contains Pfam profile: PF01217 clathrin
adaptor complex small chain
Length = 166
Score = 47.2 bits (107), Expect = 8e-06
Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Frame = +2
Query: 32 IIKGMCILDNEGNRILAKYYDKDVLPTTKEQKAFE---KNLFNKTHRAN--AEIIMLDGL 196
+IK + +++ +G LAK+YD LP K+Q+ L ++ + EI L G
Sbjct: 1 MIKAVMMMNTQGKPRLAKFYD--YLPVEKQQELIRGVFSVLCSRPENVSNFLEIESLFGP 58
Query: 197 TS--VYKSNVDLFFYVIGSSHENELILQSVLNALYESVSMLLRRNVERRILFDNLDAVML 370
S VYK L+F ++ ENEL + ++ L E++ E I+F N +
Sbjct: 59 DSRLVYKHYATLYFVLVFDGSENELAMLDLIQVLVETLDKCFSNVCELDIVF-NYSKMHA 117
Query: 371 VFDEICDRGVILDADPTSIV 430
V DEI G +L+ ++
Sbjct: 118 VLDEIVFGGQVLETSSAEVM 137
>At2g19790.1 68415.m02312 clathrin adaptor complex small chain
family protein contains Pfam profile: PF01217 clathrin
adaptor complex small chain
Length = 143
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 3/136 (2%)
Frame = +2
Query: 35 IKGMCILDNEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAE---IIMLDGLTSV 205
I+ + +++ +G LA+YY+ T +E++A E + K N + + V
Sbjct: 3 IRFILMVNKQGQTRLAQYYE---WLTLEERRALEGEIVRKCLARNDQQCSFVEHRNYKIV 59
Query: 206 YKSNVDLFFYVIGSSHENELILQSVLNALYESVSMLLRRNVERRILFDNLDAVMLVFDEI 385
Y+ LFF V ENEL + ++ L E++ E I+F +L+ + +E+
Sbjct: 60 YRRYASLFFMVGVDDDENELAILEFIHLLVETMDKHFGNVCELDIMF-HLEKAHFMLEEM 118
Query: 386 CDRGVILDADPTSIVA 433
G I++ +I++
Sbjct: 119 VMNGCIVETSKANILS 134
>At1g52620.1 68414.m05941 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 819
Score = 29.5 bits (63), Expect = 1.8
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 290 LYESVSMLLRRNVERRILFDN--LDAVMLVFDEICDRGVILDADPTSIVARAALRTEDVP 463
LY+SV ++ N +L + L V+DE+CDRG +D T I+ + V
Sbjct: 163 LYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVE 222
Query: 464 LGEQTV 481
+G + +
Sbjct: 223 VGRKLI 228
>At2g15240.1 68415.m01738 UNC-50 family protein contains Pfam
profile PF05216: UNC-50 family; contains 5 transmembrane
domains; similar to inner nuclear membrane RNA-binding
protein unc-50 related protein (GI:2735550) [Rattus
norvegicus]
Length = 252
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/54 (24%), Positives = 26/54 (48%)
Frame = -1
Query: 178 YLCICSVSLIEQILFKCLLFFSCGQHILIVILGEYSITFIIQDAHSLYYVHCWF 17
++ ICS+ L+ + C+ + H ++V++ F+I A + CWF
Sbjct: 74 FIVICSLLLVVATVAYCVTYDHSSSHAVVVVVSVLFTHFLITGA--VIATCCWF 125
>At1g80850.1 68414.m09485 methyladenine glycosylase family protein
similar to SP|P05100 DNA-3-methyladenine glycosylase I
(EC 3.2.2.20) (3-methyladenine-DNA glycosylase I,
constitutive) {Escherichia coli}; contains Pfam profile
PF03352: Methyladenine glycosylase
Length = 327
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -2
Query: 456 SSVLRAARATMDVGSASRITPLSHISSKTSITASRLSKSIRLSTFLRRSILTDS*SALST 277
+ + A + D S+ +PLS S+ + R S S+ S+ LRR+ LT+ ++
Sbjct: 68 NGISMTASYSSDASSSCESSPLSMTSTSSGKRVLRRSGSVSSSSSLRRN-LTEERDEKAS 126
Query: 276 DC 271
DC
Sbjct: 127 DC 128
>At5g06670.1 68418.m00753 kinesin motor protein-related
Length = 992
Score = 27.9 bits (59), Expect = 5.5
Identities = 20/78 (25%), Positives = 34/78 (43%)
Frame = +2
Query: 17 EPTMYIIKGMCILDNEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGL 196
E + G I+ NE N+ +A YD+ PTT + ++ H N + ++
Sbjct: 85 EEIAWYADGETIVRNENNQSIAYAYDRVFGPTTTTRNVYD---VAAQHVVNGAMAGVNVT 141
Query: 197 TSVYKSNVDLFFYVIGSS 250
SV + +F Y + SS
Sbjct: 142 LSVNSTTGTIFAYGVTSS 159
>At4g18180.1 68417.m02701 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase [Salix gilgiana] GI:6714524; contains
PF00295: Glycosyl hydrolases family 28
(polygalacturonases)
Length = 414
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -2
Query: 528 SNDHFSCSFADCRTWATVCSPSGTSSVLRAARATMDVGSASRITPLSHISSKT 370
+NDH + A W C S +S L R VGS P +++S+ T
Sbjct: 44 ANDHRDHTKAFVAAWDKACKSSSSSVNLIIPRGEFSVGSLRFSGPCTNVSNLT 96
>At2g22630.1 68415.m02682 MADS-box protein (AGL17) nearly identical
to MADS-box protein AGL17 [Arabidopsis thaliana]
GI:862648
Length = 227
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 149 NKTHRANAEIIMLDGLTSVYKSNVDLFFYVIGSSHENELILQSVLNALYES 301
N H N E+ + +++ NV+L+ G+S+ N L +++A+YES
Sbjct: 157 NLVHHENLELSRK--VQRIHQENVELYKKAYGTSNTNGLGHHELVDAVYES 205
>At1g10385.1 68414.m01170 hypothetical protein
Length = 754
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 179 IMLDGLTSVYKSNVDLFFYVIGSSHENE 262
I LDG+ V+ S VDL + S ENE
Sbjct: 449 IALDGVLQVFNSYVDLLINALPGSAENE 476
>At1g07490.1 68414.m00802 expressed protein
Length = 107
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = -2
Query: 483 ATVCSPSGTSSVLRAARATMDVGSASRITPLSHISS-KTSITASRLSKSIRLSTFLRRSI 307
A CS S TSS + +R+ S+S+ SS K S+ +S S R S+ +
Sbjct: 14 AASCSSSSTSSKSKFSRSFSTSASSSKAPAFVRSSSTKCSVPSSSSSSISRSSSKKEKGS 73
Query: 306 LTDS*SALSTD 274
+T S+L+ +
Sbjct: 74 ITQKYSSLAKE 84
>At4g38240.2 68417.m05401 alpha-1,3-mannosyl-glycoprotein
beta-1,2-N-acetylglucosaminyltransferase, putative
similar to N-acetylglucosaminyltransferase I from
Arabidopsis thaliana [gi:5139335]; contains AT-AC
non-consensus splice sites at intron 13
Length = 444
Score = 27.1 bits (57), Expect = 9.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -1
Query: 463 WHVFSPKGSSSYYGCWIRIQNNSSVAYFV 377
W SPK +Y+ W+R++ N F+
Sbjct: 274 WDELSPKWPKAYWDDWLRLKENHKGRQFI 302
>At4g38240.1 68417.m05400 alpha-1,3-mannosyl-glycoprotein
beta-1,2-N-acetylglucosaminyltransferase, putative
similar to N-acetylglucosaminyltransferase I from
Arabidopsis thaliana [gi:5139335]; contains AT-AC
non-consensus splice sites at intron 13
Length = 444
Score = 27.1 bits (57), Expect = 9.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -1
Query: 463 WHVFSPKGSSSYYGCWIRIQNNSSVAYFV 377
W SPK +Y+ W+R++ N F+
Sbjct: 274 WDELSPKWPKAYWDDWLRLKENHKGRQFI 302
>At4g35410.2 68417.m05030 clathrin adaptor complex small chain
family protein contains Pfam profile: PF01217 clathrin
adaptor complex small chain
Length = 162
Score = 27.1 bits (57), Expect = 9.6
Identities = 17/100 (17%), Positives = 42/100 (42%)
Frame = +2
Query: 191 GLTSVYKSNVDLFFYVIGSSHENELILQSVLNALYESVSMLLRRNVERRILFDNLDAVML 370
G VYK L+F + +NEL + +++ E + E ++F N
Sbjct: 54 GYKVVYKRYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIF-NFHKAYY 112
Query: 371 VFDEICDRGVILDADPTSIVARAALRTEDVPLGEQTVAQV 490
+ DE+ G + ++ ++ + + + V + ++ + +
Sbjct: 113 ILDELLIAGELQESSKKTVARIISAQDQLVEVAKEEASSI 152
>At4g14670.1 68417.m02255 heat shock protein 101, putative / HSP101,
putative similar to heat shock protein 101 GI:6715468
GB:AAF26423 from [Arabidopsis thaliana]
Length = 623
Score = 27.1 bits (57), Expect = 9.6
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +2
Query: 224 LFFYVIGSSHENELILQSVLNALYESVSMLLRRNV 328
+F+ I S+ + ++ QSV+N + +S+ L +RN+
Sbjct: 45 VFYRAITSAGDGDISAQSVVNVINQSLYKLTKRNL 79
>At3g13030.1 68416.m01623 hAT dimerisation domain-containing protein
contains Pfam profile: PF04937 domain of unknown
function (DUF659), weak hit to PF05699 hAT family
dimerisation domain
Length = 544
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -1
Query: 418 WIRIQNNSSVAYFVENQHHSVEIVEKYSPFNIPT 317
W+ I NN SV +Q H ++I S F T
Sbjct: 241 WLFINNNPSVLNIFRDQCHGIDITVSSSEFEFVT 274
>At1g20030.2 68414.m02508 pathogenesis-related thaumatin family
protein similar to receptor serine/threonine kinase PR5K
[Arabidopsis thaliana] GI:1235680; contains Pfam profile
PF00314: Thaumatin family
Length = 316
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 528 SNDHFSCSFADCRTWATVCSPSGTSSVLRAARATMD 421
S+ FSC+ DC + CS +G + A T+D
Sbjct: 80 SDGKFSCATGDCGSGKIECSGAGAAPPATLAEFTLD 115
>At1g20030.1 68414.m02509 pathogenesis-related thaumatin family
protein similar to receptor serine/threonine kinase PR5K
[Arabidopsis thaliana] GI:1235680; contains Pfam profile
PF00314: Thaumatin family
Length = 299
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 528 SNDHFSCSFADCRTWATVCSPSGTSSVLRAARATMD 421
S+ FSC+ DC + CS +G + A T+D
Sbjct: 63 SDGKFSCATGDCGSGKIECSGAGAAPPATLAEFTLD 98
>At1g14460.1 68414.m01715 DNA polymerase-related weak similarity to
DNA polymerase III holoenzyme tau subunit [Thermus
thermophilus] GI:2583049
Length = 1116
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 194 LTSVYKSNVDLFFYVIGSSHENELILQSVLNALYESVSMLLRRNVERRIL 343
L S+ + L Y+ E + + ++++ S+ M+LRRNVE RI+
Sbjct: 896 LLSISEVEGILVAYIAFGEGEIKARAERFVSSITNSIEMVLRRNVEVRII 945
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,882,704
Number of Sequences: 28952
Number of extensions: 236392
Number of successful extensions: 753
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1197101088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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