Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_E05
(617 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g23270.1 68417.m03354 protein kinase family protein contains ... 33 0.20
At3g01660.1 68416.m00097 expressed protein similar to putative p... 31 0.46
At3g54930.1 68416.m06087 serine/threonine protein phosphatase 2A... 29 1.9
At4g25080.3 68417.m03600 magnesium-protoporphyrin O-methyltransf... 29 2.5
At4g25080.2 68417.m03599 magnesium-protoporphyrin O-methyltransf... 29 2.5
At4g25080.1 68417.m03598 magnesium-protoporphyrin O-methyltransf... 29 2.5
At1g16380.1 68414.m01959 cation/proton exchanger, putative (CHX1... 29 3.3
At3g24080.1 68416.m03024 KRR1 family protein contains Pfam PF051... 28 4.3
At3g10070.1 68416.m01207 transcription initiation factor IID (TF... 28 4.3
At5g17490.1 68418.m02052 gibberellin response modulator, putativ... 28 5.7
At2g37980.1 68415.m04662 expressed protein similar to axi 1 [Nic... 28 5.7
At3g05390.1 68416.m00589 expressed protein ; expression supporte... 27 7.5
At4g35560.1 68417.m05053 expressed protein 27 10.0
At4g31570.1 68417.m04483 expressed protein 27 10.0
At4g28890.1 68417.m04129 zinc finger (C3HC4-type RING finger) fa... 27 10.0
At1g74420.2 68414.m08622 xyloglucan fucosyltransferase, putative... 27 10.0
At1g74420.1 68414.m08621 xyloglucan fucosyltransferase, putative... 27 10.0
>At4g23270.1 68417.m03354 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 645
Score = 32.7 bits (71), Expect = 0.20
Identities = 28/96 (29%), Positives = 46/96 (47%)
Frame = -3
Query: 381 LASSITHSSYFGFFLFSHLALSACFNILSEASTETRLEPFFYQHHGVNPCSASTVQHFLA 202
L SSIT S+ F+L+ + +++ F+ S ++ T L+ +N S ST F
Sbjct: 12 LFSSITASAQNTFYLYHNCSVTTTFS--SNSTYSTNLKTLLSSLSSLNASSYST--GFQT 67
Query: 201 SVFFQKPDEEVFIILCSFITVSNEFVPRSSCLTVCI 94
+ Q PD + LC + VS+E SC+T +
Sbjct: 68 ATAGQAPDRVTGLFLCR-VDVSSEVC--RSCVTFAV 100
>At3g01660.1 68416.m00097 expressed protein similar to putative
protein GB:CAB45319 [Arabidopsis thaliana]
Length = 273
Score = 31.5 bits (68), Expect = 0.46
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +2
Query: 296 DKMLKHALKARWEKRKNPKYDEWVIEEANWETLPRDIENFYHGASFDAVIC-LGNSFAHL 472
+K++ H L A+ E +NP+ D + +++ N E + E+ Y FDAV+C +G +
Sbjct: 116 EKVVGHGLNAQ-ELARNPRLDYFFVKDLN-EDQKFEFEDKY----FDAVLCSVGVQYL-- 167
Query: 473 LDEYEDQRIQKMCLKNFAKCLKPGGLLFIDHRN 571
Q+ +K+ + + + LKPGG+L + N
Sbjct: 168 ------QQPEKVFAEVY-RVLKPGGVLIVSFSN 193
>At3g54930.1 68416.m06087 serine/threonine protein phosphatase 2A
(PP2A) regulatory subunit B', putative similar to
SWISS-PROT:Q28653 serine/threonine protein phosphatase
2A, 56 kDa regulatory subunit, delta isoform (PP2A, B
subunit, B' delta isoform, PP2A, B subunit, B56 delta
isoform, PP2A, B subunit, PR61 delta isoform, PP2A, B
subunit, R5 delta isoform, PP2A, B subunit, B'-gamma)
[Oryctolagus cuniculus]; contains Pfam domain, PF01603:
Protein phosphatase 2A regulatory B subunit (B56 family)
Length = 497
Score = 29.5 bits (63), Expect = 1.9
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = -1
Query: 266 PSSTSIMESIPVPQAPSSTFLHPCFFKSPMRKSL*FC--VLSLLSPMNLFHARAALPSAY 93
PSS S ES Q+PS T HP F +P+ + L V S P+ LF +A + S +
Sbjct: 46 PSSVSNGESQTTAQSPSQTPNHPMFTTTPILEVLPLLKDVSSSDRPL-LFMKKAHMCSCH 104
Query: 92 *SFTPSEGIPSDLE*K 45
F+ + +P + E K
Sbjct: 105 CDFSDTLIMPREKEIK 120
>At4g25080.3 68417.m03600 magnesium-protoporphyrin
O-methyltransferase, putative / magnesium-protoporphyrin
IX methyltransferase, putative similar to SP|Q55467
Magnesium-protoporphyrin O-methyltransferase (EC
2.1.1.1) (Magnesium-protoporphyrin IX methyltransferase)
{Synechocystis sp.}
Length = 312
Score = 29.1 bits (62), Expect = 2.5
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 16/103 (15%)
Frame = +1
Query: 91 QYADGKAARAWNKFIGDSNERTQNYKDFLIGLLK-------------KHGCKKVLDGACG 231
+Y + W K G+++E + KD +G K V D CG
Sbjct: 95 EYFNSTGFERWRKIYGETDEVNRVQKDIRLGHAKTVENTMLMLTEDRSLAGVTVCDAGCG 154
Query: 232 TGIDSMMLVEEG---FQSCFS*RF*QNVEARAQSQVGEEEKPK 351
TG+ S+ L +EG S S E +A++Q+ E PK
Sbjct: 155 TGLLSIPLAKEGAIVSASDISAAMVAEAEMKAKAQLPSENLPK 197
>At4g25080.2 68417.m03599 magnesium-protoporphyrin
O-methyltransferase, putative / magnesium-protoporphyrin
IX methyltransferase, putative similar to SP|Q55467
Magnesium-protoporphyrin O-methyltransferase (EC
2.1.1.1) (Magnesium-protoporphyrin IX methyltransferase)
{Synechocystis sp.}
Length = 312
Score = 29.1 bits (62), Expect = 2.5
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 16/103 (15%)
Frame = +1
Query: 91 QYADGKAARAWNKFIGDSNERTQNYKDFLIGLLK-------------KHGCKKVLDGACG 231
+Y + W K G+++E + KD +G K V D CG
Sbjct: 95 EYFNSTGFERWRKIYGETDEVNRVQKDIRLGHAKTVENTMLMLTEDRSLAGVTVCDAGCG 154
Query: 232 TGIDSMMLVEEG---FQSCFS*RF*QNVEARAQSQVGEEEKPK 351
TG+ S+ L +EG S S E +A++Q+ E PK
Sbjct: 155 TGLLSIPLAKEGAIVSASDISAAMVAEAEMKAKAQLPSENLPK 197
>At4g25080.1 68417.m03598 magnesium-protoporphyrin
O-methyltransferase, putative / magnesium-protoporphyrin
IX methyltransferase, putative similar to SP|Q55467
Magnesium-protoporphyrin O-methyltransferase (EC
2.1.1.1) (Magnesium-protoporphyrin IX methyltransferase)
{Synechocystis sp.}
Length = 312
Score = 29.1 bits (62), Expect = 2.5
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 16/103 (15%)
Frame = +1
Query: 91 QYADGKAARAWNKFIGDSNERTQNYKDFLIGLLK-------------KHGCKKVLDGACG 231
+Y + W K G+++E + KD +G K V D CG
Sbjct: 95 EYFNSTGFERWRKIYGETDEVNRVQKDIRLGHAKTVENTMLMLTEDRSLAGVTVCDAGCG 154
Query: 232 TGIDSMMLVEEG---FQSCFS*RF*QNVEARAQSQVGEEEKPK 351
TG+ S+ L +EG S S E +A++Q+ E PK
Sbjct: 155 TGLLSIPLAKEGAIVSASDISAAMVAEAEMKAKAQLPSENLPK 197
>At1g16380.1 68414.m01959 cation/proton exchanger, putative (CHX1)
monovalent cation:proton antiporter family 2 (CPA2)
member, PMID:11500563
Length = 785
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = -3
Query: 261 FYQHHGVNPCSASTVQHFLASVFFQKPDEEVFIILCSFITVSNE 130
F+Q HG + +VQH +A++FF PD+ + LC ++T +++
Sbjct: 601 FHQLHG-----SDSVQH-VAALFFGGPDDREALSLCKWLTNNSQ 638
>At3g24080.1 68416.m03024 KRR1 family protein contains Pfam PF05178:
Krr1 family
Length = 638
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 67 IPSEGVKDQYADGKAARAWNKFIGDSNERTQN--YKDFLIGLLKKHGCKKV 213
+ EG D D + A+ +++ GD E T+N KD+L+ L K ++V
Sbjct: 188 VEKEGDDDVEVDEELAKKMDEYYGDEAEATENQFLKDYLVKQLWKEKEERV 238
>At3g10070.1 68416.m01207 transcription initiation factor IID
(TFIID) subunit A family protein similar to hypothetical
protein GB:CAB10099 [Schizosaccharomyces pombe];
contains Pfam profile PF03847: Transcription initiation
factor TFIID subunit A
Length = 539
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 269 NPSSTSIMESIPVPQAPSSTFLHP 198
NPS +S++ SIP AP S L+P
Sbjct: 38 NPSPSSVVSSIPSSPAPQSPSLNP 61
>At5g17490.1 68418.m02052 gibberellin response modulator, putative /
gibberellin-responsive modulator, putative putative
member of the VHIID domain transcription factor family
RGAL - Arabidopsis thaliana, EMBL:AJ224957
Length = 523
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 272 NLVSVDASDKMLKHALKARWEKR 340
NLV+ + SD++ +H A+W KR
Sbjct: 437 NLVATEGSDRIERHETLAQWRKR 459
>At2g37980.1 68415.m04662 expressed protein similar to axi 1
[Nicotiana tabacum] GI:559921; contains Pfam profile
PF03138: Plant protein family
Length = 638
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 396 RATSRTFTMALRSMRSSAL--EIPSPISWTSTKISGYRRCA*R 518
RA ++MA R+M + + ++P P W + YR+CA R
Sbjct: 173 RALHEDWSMAQRAMTENVVIEKLPIPEIWQKPESGNYRQCASR 215
>At3g05390.1 68416.m00589 expressed protein ; expression supported
by MPSS
Length = 463
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 470 LLDEYEDQRIQKMCLKNFAKCLKPGGLLFID 562
L+D + D + L ++ + L+PGGLL+ID
Sbjct: 384 LMDGWIDLLLMDFVLYDWDRVLRPGGLLWID 414
>At4g35560.1 68417.m05053 expressed protein
Length = 917
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 55 RSEGIPSEGVKDQYADGKAARAWNKFIGDSNERTQ 159
+SE IP +K YA+GKA+R + IG S+ Q
Sbjct: 132 KSEKIPIASLKWVYAEGKASRVY--VIGSSSNSLQ 164
>At4g31570.1 68417.m04483 expressed protein
Length = 2712
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +3
Query: 447 ALEIPSPISWTSTKISGYRRCA*RISQSVSNREVYYSSIT 566
++E+ + I W ++ I+ + Q + N EVY S+T
Sbjct: 1574 SMEVENKIEWLASTITEATHDRDNLQQKIDNLEVYCQSVT 1613
>At4g28890.1 68417.m04129 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 386
Score = 27.1 bits (57), Expect = 10.0
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +2
Query: 332 EKRKNPKYDEWVIEEANWETLPRD----IENFYHGASFDAVICLGNSFAHLLDEYEDQRI 499
E R++ + ++ E E + R+ F G SF ++ LGN LLDE+ + +
Sbjct: 144 EIREDSSLELYIEREEEEERIHREELSGSSRFSIGESFRKILKLGNKEKTLLDEHVNDKD 203
Query: 500 QKMCLKNF 523
+K + F
Sbjct: 204 EKKLMHKF 211
>At1g74420.2 68414.m08622 xyloglucan fucosyltransferase, putative
(FUT3) identical to SP|Q9CA71 Probable
fucosyltransferase 3 (EC 2.4.1.-) (AtFUT3) {Arabidopsis
thaliana}; similar to SP|Q9SWH5 Galactoside
2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan
alpha-(1,2)-fucosyltransferase) (AtFUT1) {Arabidopsis
thaliana}
Length = 525
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -3
Query: 303 ILSEASTETRLEPFFYQHHGVNPCSASTVQH 211
+L++A T EP+ + + PCS +T+ H
Sbjct: 491 VLNKAENGTAHEPYCVKARSIEPCSQATLFH 521
>At1g74420.1 68414.m08621 xyloglucan fucosyltransferase, putative
(FUT3) identical to SP|Q9CA71 Probable
fucosyltransferase 3 (EC 2.4.1.-) (AtFUT3) {Arabidopsis
thaliana}; similar to SP|Q9SWH5 Galactoside
2-alpha-L-fucosyltransferase (EC 2.4.1.69) (Xyloglucan
alpha-(1,2)-fucosyltransferase) (AtFUT1) {Arabidopsis
thaliana}
Length = 493
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -3
Query: 303 ILSEASTETRLEPFFYQHHGVNPCSASTVQH 211
+L++A T EP+ + + PCS +T+ H
Sbjct: 459 VLNKAENGTAHEPYCVKARSIEPCSQATLFH 489
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,149,074
Number of Sequences: 28952
Number of extensions: 315622
Number of successful extensions: 971
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1246162608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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