Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_E04
         (494 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69384-12|CAM33510.1|  319|Caenorhabditis elegans Hypothetical p...    28   4.3  
Z69384-11|CAC42340.2|  384|Caenorhabditis elegans Hypothetical p...    28   4.3  
Z69383-16|CAM33511.1|  319|Caenorhabditis elegans Hypothetical p...    28   4.3  
Z69383-15|CAC42286.2|  384|Caenorhabditis elegans Hypothetical p...    28   4.3  
Z36719-1|CAA85311.2|  576|Caenorhabditis elegans Hypothetical pr...    27   5.7  
AL132847-2|CAB63372.1|  343|Caenorhabditis elegans Hypothetical ...    27   5.7  
Z83221-4|CAB05704.1|  298|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>Z69384-12|CAM33510.1|  319|Caenorhabditis elegans Hypothetical
           protein F13E9.11b protein.
          Length = 319

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +3

Query: 162 NLQLILMEPQVLWSRYRYWKRKSQAQCS 245
           N+ +I +  + LW+R +YW+ K +A  S
Sbjct: 275 NIAMIYIALRELWTRLQYWRMKRRAALS 302


>Z69384-11|CAC42340.2|  384|Caenorhabditis elegans Hypothetical
           protein F13E9.11a protein.
          Length = 384

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +3

Query: 162 NLQLILMEPQVLWSRYRYWKRKSQAQCS 245
           N+ +I +  + LW+R +YW+ K +A  S
Sbjct: 340 NIAMIYIALRELWTRLQYWRMKRRAALS 367


>Z69383-16|CAM33511.1|  319|Caenorhabditis elegans Hypothetical
           protein F13E9.11b protein.
          Length = 319

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +3

Query: 162 NLQLILMEPQVLWSRYRYWKRKSQAQCS 245
           N+ +I +  + LW+R +YW+ K +A  S
Sbjct: 275 NIAMIYIALRELWTRLQYWRMKRRAALS 302


>Z69383-15|CAC42286.2|  384|Caenorhabditis elegans Hypothetical
           protein F13E9.11a protein.
          Length = 384

 Score = 27.9 bits (59), Expect = 4.3
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +3

Query: 162 NLQLILMEPQVLWSRYRYWKRKSQAQCS 245
           N+ +I +  + LW+R +YW+ K +A  S
Sbjct: 340 NIAMIYIALRELWTRLQYWRMKRRAALS 367


>Z36719-1|CAA85311.2|  576|Caenorhabditis elegans Hypothetical
           protein C06C3.3 protein.
          Length = 576

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 17/67 (25%), Positives = 33/67 (49%)
 Frame = -3

Query: 327 APWRLTLS*TNPAVAAPN*LVSEINGAKSTELVIFVSSIGTLTIAPEVPSELIVSSPACR 148
           A + L L   NP + AP  + + ++ A+S ++ +     GT+T  P  P + I+S     
Sbjct: 100 ARFTLRLKRYNPIIRAPELIPTFLHSAESMDIYLKKEGYGTITGLP-YPFDGILSRSPSA 158

Query: 147 RTLELVH 127
             +++ H
Sbjct: 159 SNIQIKH 165


>AL132847-2|CAB63372.1|  343|Caenorhabditis elegans Hypothetical
           protein Y48G10A.3 protein.
          Length = 343

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 152 QAGELTINSDGTSGAMVKVPILE 220
           Q   L I+ DGT+G  +KVP+L+
Sbjct: 233 QRTPLPISRDGTTGVQLKVPVLQ 255


>Z83221-4|CAB05704.1|  298|Caenorhabditis elegans Hypothetical
           protein C49A1.6 protein.
          Length = 298

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = -2

Query: 430 VATLPDKSCRCYETGSLYQHRQLSPFQDMSVCEGSSVAVDIIVN*SSCS 284
           VA   D  C+ +E GS+      S  + +    G  VAV II N +SC+
Sbjct: 61  VAGFEDGICKLFEIGSI------STIKRLDANSGKQVAVKIISNLTSCA 103


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,154,111
Number of Sequences: 27780
Number of extensions: 216069
Number of successful extensions: 408
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 408
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)