Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_D23
(519 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP8A3.09c |paa1||protein phosphatase regulatory subunit Paa1|S... 168 4e-43
SPAC2F3.06c |kap104||karyopherin Kap104|Schizosaccharomyces pomb... 36 0.005
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 30 0.24
SPBC1734.02c |cdc27|SPBC337.18c|DNA polymerase delta subunit Cdc... 27 2.2
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 27 2.2
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 26 3.9
SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr 2... 25 5.1
SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster... 25 5.1
SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor Thi1|Sc... 25 6.8
SPAPB8E5.07c |||ribosome biogenesis protein Rrp12|Schizosaccharo... 25 9.0
>SPAP8A3.09c |paa1||protein phosphatase regulatory subunit
Paa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 168 bits (409), Expect = 4e-43
Identities = 80/165 (48%), Positives = 111/165 (67%), Gaps = 4/165 (2%)
Frame = +1
Query: 1 VELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTGLCMSWLIDHVYAIREAATLNLKK 180
V LAED +WRVRLAII+++PLLA QLG EFF+EK+ LCMSWL DHVY+IREAA NL+K
Sbjct: 407 VTLAEDKQWRVRLAIIDYIPLLAQQLGVEFFNEKMGNLCMSWLEDHVYSIREAAIKNLRK 466
Query: 181 LVEQYGSTWAETNVIPKVLTMSREQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSM 360
L E +G WA +IPK L M NYL+RMT +F I+ ++ ++ + +LPT+ +
Sbjct: 467 LTEIFGLEWATETIIPKFLAMRSHPNYLYRMTTIFAISEIAPALNAEVIEKQILPTLEQL 526
Query: 361 ADDSVANVRFNVAKTLQKMAPFL----DPAVIQPQVKPVLEKFER 483
+D + N+RFNVAK + + P L D V + Q+ P+LE+ +
Sbjct: 527 VNDPIPNIRFNVAKAFEVLKPVLAAGGDSTVYEQQIIPLLEQLTK 571
Score = 54.4 bits (125), Expect = 1e-08
Identities = 33/140 (23%), Positives = 68/140 (48%)
Frame = +1
Query: 1 VELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTGLCMSWLIDHVYAIREAATLNLKK 180
V L +DT+ VR AI +P L + E++ + + D +R A +N+
Sbjct: 290 VLLMKDTEQEVRRAIATQIPGFCELLDKRIVLEEIIPVIQELINDPAQHVRAALGMNIGA 349
Query: 181 LVEQYGSTWAETNVIPKVLTMSREQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSM 360
L Q G ++P L + +++N R+ + + V+++V G ++ ++ LLP ++++
Sbjct: 350 LAPQLGKEKTTEYLLPMFLELLKDENPEVRLNIISKLEVVNKVVGIELLSQSLLPAIVTL 409
Query: 361 ADDSVANVRFNVAKTLQKMA 420
A+D VR + + +A
Sbjct: 410 AEDKQWRVRLAIIDYIPLLA 429
Score = 42.3 bits (95), Expect = 4e-05
Identities = 31/151 (20%), Positives = 56/151 (37%)
Frame = +1
Query: 16 DTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTGLCMSWLIDHVYAIREAATLNLKKLVEQY 195
D+ WR R + + LA +G ++L + + D +R A + E
Sbjct: 256 DSSWRTRYMVAANFVKLAKVVGPSLIKDELIKPFVLLMKDTEQEVRRAIATQIPGFCELL 315
Query: 196 GSTWAETNVIPKVLTMSREQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDSV 375
+IP + + + R I L+ GK+ TT LLP L + D
Sbjct: 316 DKRIVLEEIIPVIQELINDPAQHVRAALGMNIGALAPQLGKEKTTEYLLPMFLELLKDEN 375
Query: 376 ANVRFNVAKTLQKMAPFLDPAVIQPQVKPVL 468
VR N+ L+ + + ++ + P +
Sbjct: 376 PEVRLNIISKLEVVNKVVGIELLSQSLLPAI 406
>SPAC2F3.06c |kap104||karyopherin Kap104|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 910
Score = 35.5 bits (78), Expect = 0.005
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +1
Query: 220 VIPKVLTMSREQNYLHRMTYLFCINVLSEVCGKDITTRV--LLPTVLSMADDSVANVRFN 393
+IP+ + ++R +N R LFC+N + + + + L T ++A D NVR N
Sbjct: 179 MIPRFIELARHENPKIRTDALFCLNQFVLIQSQSLYAHIDTFLETCYALATDVSPNVRKN 238
Query: 394 VAKTLQKMAPFLDPAVIQPQVKPVLE 471
V + L + + P I P + ++E
Sbjct: 239 VCQALVYLLD-VRPDKIAPSLGSIVE 263
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 29.9 bits (64), Expect = 0.24
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +1
Query: 16 DTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTGLCMSWLIDHVYAIREAATLNLKKLVE 189
DT W +R A E + L+ +G DE + L + L+D A+ E+ + L+E
Sbjct: 642 DTDWMLRCAFFESITGLSIFIGPRSVDEYILPLMLQALVDPEPAVLESVLGSFSGLIE 699
>SPBC1734.02c |cdc27|SPBC337.18c|DNA polymerase delta subunit
Cdc27|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 26.6 bits (56), Expect = 2.2
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 127 LIDHVYAIREAATLNLKKLVEQYGSTWAETNVIPKVL 237
L+ VY IRE L K+ ++YG + E N +P+VL
Sbjct: 120 LLPAVYEIREKDVLYKKEDADKYGFIFNE-NSVPRVL 155
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 26.6 bits (56), Expect = 2.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 516 EAKYFTSTSGSTFKFLQDRFNLGLDH 439
E Y S S ST K L+++FN G+D+
Sbjct: 1102 EGIYRLSGSASTIKHLKEQFNEGVDY 1127
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 25.8 bits (54), Expect = 3.9
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 467 WRNLNVDPDVDVKYF 511
W NLN+DP+ D+ F
Sbjct: 1427 WANLNIDPEADLLIF 1441
>SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 485
Score = 25.4 bits (53), Expect = 5.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 247 REQNYLHRMTYLFCINVLSEVCGKDITTRVLLP 345
R Q Y+ L + LS++C KD T L+P
Sbjct: 122 RNQFYIRFCLELLSSSQLSDICIKDFVTSYLVP 154
>SPAC2H10.01 |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 480
Score = 25.4 bits (53), Expect = 5.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 206 GQRRMSFLKC*RCPGNRITCTG 271
G RR + + C RC +I CTG
Sbjct: 7 GPRRRTAVACDRCRRRKIRCTG 28
>SPAC1486.10 |thi1|ntf1, SPAC6G10.01|transcription factor
Thi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +2
Query: 203 PGQRRMSFLKC*RCPGNRITCTG*LTC 283
P QRR F C C +I C G C
Sbjct: 29 PEQRRRVFRACKHCRQKKIKCNGGQPC 55
>SPAPB8E5.07c |||ribosome biogenesis protein Rrp12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1163
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 337 LLPTVLSMADDSVANVRFNVAKTLQKMAPFLDPAVIQP 450
L+P +L+ + + AN+R V +KM A I+P
Sbjct: 909 LIPNLLAWSHEGKANLRVKVRHLFEKMGRKYGIAEIEP 946
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,098,854
Number of Sequences: 5004
Number of extensions: 39231
Number of successful extensions: 110
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 110
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 210309424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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