Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_D23
(519 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43136| Best HMM Match : HEAT (HMM E-Value=1.7e-15) 218 3e-57
SB_29772| Best HMM Match : HEAT (HMM E-Value=1.54143e-44) 124 3e-29
SB_3285| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.57
SB_56482| Best HMM Match : HEAT (HMM E-Value=1.9e-16) 29 1.7
SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_38213| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
>SB_43136| Best HMM Match : HEAT (HMM E-Value=1.7e-15)
Length = 426
Score = 218 bits (532), Expect = 3e-57
Identities = 107/172 (62%), Positives = 133/172 (77%), Gaps = 14/172 (8%)
Frame = +1
Query: 1 VELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTGLCMSWLIDHVYAIREAATLNLKK 180
VELAEDTKWRVRLAIIE+MPLLAGQLG +FFDEKL LCMSWL+DHV +IREAA +NLKK
Sbjct: 33 VELAEDTKWRVRLAIIEYMPLLAGQLGVDFFDEKLNTLCMSWLVDHVCSIREAAAINLKK 92
Query: 181 LVEQYGSTWAETNVIPKVLTMSREQNYLHRMTYLFCIN--------------VLSEVCGK 318
LVE++G WA+ VIPKVL M+RE NYLHR+T L ++ VL++VCG
Sbjct: 93 LVEKFGPEWAQQQVIPKVLAMAREPNYLHRLTTLNSVSVRTQPIFLSVVQYGVLADVCGP 152
Query: 319 DITTRVLLPTVLSMADDSVANVRFNVAKTLQKMAPFLDPAVIQPQVKPVLEK 474
+ ++++LP VL++A D+VANVRFNVAKTLQK+ P LD + IQ Q+KP L+K
Sbjct: 153 ENISKLMLPVVLNLATDNVANVRFNVAKTLQKIGPLLDASTIQAQIKPCLDK 204
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +2
Query: 476 LNVDPDVDVKYFA 514
LN D DVDVKYFA
Sbjct: 205 LNADADVDVKYFA 217
>SB_29772| Best HMM Match : HEAT (HMM E-Value=1.54143e-44)
Length = 405
Score = 124 bits (300), Expect = 3e-29
Identities = 56/71 (78%), Positives = 64/71 (90%)
Frame = +1
Query: 1 VELAEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTGLCMSWLIDHVYAIREAATLNLKK 180
VELAEDTKWRVRLAIIE+MPLLAGQLG +FFDEKL LCMSWL+DHV +IREAA +NLKK
Sbjct: 318 VELAEDTKWRVRLAIIEYMPLLAGQLGVDFFDEKLNTLCMSWLVDHVCSIREAAAINLKK 377
Query: 181 LVEQYGSTWAE 213
LVE++G WA+
Sbjct: 378 LVEKFGPEWAQ 388
Score = 52.4 bits (120), Expect = 2e-07
Identities = 41/137 (29%), Positives = 57/137 (41%), Gaps = 4/137 (2%)
Frame = +1
Query: 10 AEDTKWRVRLAIIEHMPLLAGQLGQEFFDEKLTGLCMSWLIDHVYAIREAATLNLKKLVE 189
A D WRVR + + + L +G E +L L D +R AA +K+ E
Sbjct: 161 AYDKSWRVRYMVADKITELQKAVGPEITKTELVPAFQVLLKDCEAEVRAAAAGKVKEFSE 220
Query: 190 QYGSTWAE----TNVIPKVLTMSREQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLS 357
S E TN++P V + + N + I LS + GKD T LLP L+
Sbjct: 221 SLSSDIRESVLMTNILPCVKELVIDPNQHVKSALASVIMGLSPLLGKDNTIEHLLPLFLT 280
Query: 358 MADDSVANVRFNVAKTL 408
M D VR N+ L
Sbjct: 281 MLKDEFPEVRLNIISNL 297
Score = 31.5 bits (68), Expect = 0.43
Identities = 17/89 (19%), Positives = 43/89 (48%)
Frame = +1
Query: 205 WAETNVIPKVLTMSREQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDSVANV 384
+ ++ ++P +S ++ R+ + +++V + +L+PTV S A D V
Sbjct: 109 FVKSELVPLFTNLSSDEQDSVRLLAVENCPQIAQVLPHEDKDSILMPTVKSAAYDKSWRV 168
Query: 385 RFNVAKTLQKMAPFLDPAVIQPQVKPVLE 471
R+ VA + ++ + P + + ++ P +
Sbjct: 169 RYMVADKITELQKAVGPEITKTELVPAFQ 197
Score = 31.1 bits (67), Expect = 0.57
Identities = 15/68 (22%), Positives = 39/68 (57%)
Frame = +1
Query: 217 NVIPKVLTMSREQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDSVANVRFNV 396
+++P LTM +++ R+ + ++ +++V G ++ LLP ++ +A+D+ VR +
Sbjct: 273 HLLPLFLTMLKDEFPEVRLNIISNLDCVNQVIGVHQLSQSLLPAIVELAEDTKWRVRLAI 332
Query: 397 AKTLQKMA 420
+ + +A
Sbjct: 333 IEYMPLLA 340
>SB_3285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1437
Score = 31.1 bits (67), Expect = 0.57
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = +1
Query: 67 AGQLGQEFFDEKLTGLCMSWLIDHVYAIREAATLNLKKLVEQYGSTWAETNVIPKVLTMS 246
AG L F K GL +S + DH+ A LN K ++Q G AE V+ +S
Sbjct: 933 AGPLRNAF---KRMGLPISLIPDHIDGSLSATILNYLKKIKQQGKIEAERMVVLVTQNLS 989
Query: 247 RE 252
RE
Sbjct: 990 RE 991
>SB_56482| Best HMM Match : HEAT (HMM E-Value=1.9e-16)
Length = 425
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 241 MSREQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADD 369
++ + + R T F I+ L++V G+D+T L+PT S D
Sbjct: 57 LASDMQWKVRRTLAFSIHELAQVLGEDLTKTELVPTFNSFLKD 99
>SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 247 REQNYLHRMTYLFCINVLSEVCGKDITTRVLLPTVLSMADDSV-ANVRFNVA 399
RE Y+ L C N ++ +C + + V+ P + ++ V ANV VA
Sbjct: 89 RELRYIRLRFLLTCYNHVTSICSSPLVSLVIFPAYAILGNELVAANVFATVA 140
>SB_38213| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 211
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/22 (63%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = +2
Query: 455 LNLSWRNLNVDPDV--DVKYFA 514
L LSW NVDPDV V YFA
Sbjct: 177 LGLSWLRKNVDPDVTRGVVYFA 198
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,480,370
Number of Sequences: 59808
Number of extensions: 321817
Number of successful extensions: 579
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1160542895
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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