BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_D21
(451 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT014632-1|AAT27256.1| 2112|Drosophila melanogaster SD12316p pro... 29 2.2
AY058603-1|AAL13832.1| 1553|Drosophila melanogaster LD29482p pro... 29 2.2
AE014298-3031|AAF50897.2| 2181|Drosophila melanogaster CG1412-PA... 29 2.2
>BT014632-1|AAT27256.1| 2112|Drosophila melanogaster SD12316p protein.
Length = 2112
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 84 ALLILGFIASQATCMNIRYKRQIENNANLFIGTRNGIG 197
AL G + T MN+ KRQI+N N I R+ +G
Sbjct: 1909 ALSTTGLTKDEKTDMNLTKKRQIQNKQNRSIKRRHTVG 1946
>AY058603-1|AAL13832.1| 1553|Drosophila melanogaster LD29482p protein.
Length = 1553
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 84 ALLILGFIASQATCMNIRYKRQIENNANLFIGTRNGIG 197
AL G + T MN+ KRQI+N N I R+ +G
Sbjct: 1350 ALSTTGLTKDEKTDMNLTKKRQIQNKQNRSIKRRHTVG 1387
>AE014298-3031|AAF50897.2| 2181|Drosophila melanogaster CG1412-PA
protein.
Length = 2181
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 84 ALLILGFIASQATCMNIRYKRQIENNANLFIGTRNGIG 197
AL G + T MN+ KRQI+N N I R+ +G
Sbjct: 1978 ALSTTGLTKDEKTDMNLTKKRQIQNKQNRSIKRRHTVG 2015
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,332,596
Number of Sequences: 53049
Number of extensions: 297458
Number of successful extensions: 637
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -