Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_D20
(502 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 6e-10
SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 50 1e-06
SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 48 4e-06
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 39 0.003
SB_43725| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_8405| Best HMM Match : PAN (HMM E-Value=0.044) 31 0.71
SB_37668| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_29945| Best HMM Match : DUF125 (HMM E-Value=1.7) 30 1.2
SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41) 29 1.6
SB_30230| Best HMM Match : CH (HMM E-Value=0.0035) 29 2.2
SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_53508| Best HMM Match : Shugoshin_N (HMM E-Value=6.4) 28 3.8
SB_4707| Best HMM Match : Toxin_17 (HMM E-Value=8.2) 28 3.8
SB_39949| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_13477| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 28 5.0
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0) 27 6.6
>SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 60.9 bits (141), Expect = 6e-10
Identities = 43/136 (31%), Positives = 62/136 (45%)
Frame = +2
Query: 2 WIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLLSYPEIC 181
WI G P++K+ LGI GR++ L + ++ P A KGG+ GPYTK G ++Y EIC
Sbjct: 245 WIAGGMPSNKIALGIPLYGRSFTLKTANKTLDAP---ATKGGQ-GPYTKEAGYIAYFEIC 300
Query: 182 AKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKASYVKT 361
+ L DP P WV Y+D + K +Y+K
Sbjct: 301 -----------KMGLSVTRDP-------VLVSPYGVDVNNQWVGYDDVTSVQEKVNYIKK 342
Query: 362 KNLGGVSIMDLSMDDF 409
K+L G + +DDF
Sbjct: 343 KSLLGAMFWAMDLDDF 358
>SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 569
Score = 50.0 bits (114), Expect = 1e-06
Identities = 41/137 (29%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
Frame = +2
Query: 2 WIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLLSYPEIC 181
WI GAP K+ LG+ T GR +KL +D G+ A+ G YT+ G L+Y EIC
Sbjct: 358 WIDKGAPASKIALGLGTYGRAFKL-ADQTRHGL-KAPANGNPTRGQYTREPGFLAYYEIC 415
Query: 182 AKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKAS-YVK 358
K+N + A + P G WV Y+D + K +K
Sbjct: 416 ----------------KMNLQVTSTESSAVKAPYGH-VGDLWVGYDDEYSLSLKVERVIK 458
Query: 359 TKNLGGVSIMDLSMDDF 409
K + G + +DDF
Sbjct: 459 AKGMAGAMFWAIPLDDF 475
>SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 829
Score = 48.0 bits (109), Expect = 4e-06
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 1/137 (0%)
Frame = +2
Query: 5 IQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLLSYPEICA 184
I+NG P +K+VLG+ T GR + L+S + G +AG YT +G L+Y EIC
Sbjct: 645 IRNGMPANKIVLGLGTYGRAFGLES----------AGNNGLDAGKYTGAKGFLAYFEICK 694
Query: 185 KLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKASYVKTK 364
+ +N K Y ++ G WV +++P + K V K
Sbjct: 695 MGLTVVENNKAK------------APYGYK-------GHDWVGFDNPKSLIYKIDNVVKK 735
Query: 365 N-LGGVSIMDLSMDDFA 412
N L GV + +DDF+
Sbjct: 736 NQLRGVMFWAIDLDDFS 752
Score = 37.1 bits (82), Expect = 0.008
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = +2
Query: 122 GGEAGPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGG 301
G +G YT +G L+Y EIC + + H K N P Y ++ G
Sbjct: 277 GVHSGKYTDAEGFLAYYEICKRGLTV------VHKNKANAP------YGYK-------GK 317
Query: 302 FWVSYEDPDTAGNKASYVKTKN-LGGVSIMDLSMDDFA 412
W+ ++DP++ K V KN L GV + +DDF+
Sbjct: 318 DWIGFDDPNSLVYKIDNVVKKNQLRGVMFWAIDLDDFS 355
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 42.3 bits (95), Expect = 2e-04
Identities = 33/136 (24%), Positives = 60/136 (44%)
Frame = +2
Query: 2 WIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLLSYPEIC 181
W++ G P K+ LG++ G ++L ++ + P + +KG + PY E+C
Sbjct: 627 WMEKGMPCGKIALGMANYGHAFELSDPTKTALGAPANVNKG-RSYPYY---------ELC 676
Query: 182 AKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKASYVKT 361
K P + ++P+K Y + G W++Y+D + G K +K
Sbjct: 677 ----------KLPLTKVTDNPAK--APYGYH-------GSQWIAYDDVTSLGRKVELIKK 717
Query: 362 KNLGGVSIMDLSMDDF 409
+NL G + +DDF
Sbjct: 718 ENLLGAMFWAIDLDDF 733
>SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)
Length = 184
Score = 38.7 bits (86), Expect = 0.003
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Frame = +2
Query: 134 GPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVS 313
GPYT+ G LSY EIC + P + +V P Y + + D + WV
Sbjct: 16 GPYTRESGFLSYYEICDMM--PKMKTMKTDQSEVRAP------YGY-VKQDWAD--VWVG 64
Query: 314 YEDPDTAGNKA-SYVKTKNLGGVSIMDLSMDDF 409
Y+D + K +K K L G L +DDF
Sbjct: 65 YDDERSLQLKVEEVIKAKGLAGAMFWALDLDDF 97
>SB_43725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 173
Score = 31.1 bits (67), Expect = 0.53
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -1
Query: 460 YFAALRIGYLSPVQRPRKIIHGKVHDGHTAKVLCFHVTSFVSGR 329
YF + L+ QR +I+H K H GH+ + H TSFV +
Sbjct: 109 YFPKPKYATLAHEQRDSRILHAKNHCGHSPPI-SDHFTSFVPSK 151
>SB_8405| Best HMM Match : PAN (HMM E-Value=0.044)
Length = 387
Score = 30.7 bits (66), Expect = 0.71
Identities = 30/122 (24%), Positives = 46/122 (37%), Gaps = 6/122 (4%)
Frame = +2
Query: 14 GAPTHKLVLGISTTGRTWKLDSDSEISGVPPI---HADKGGEAGPYTKVQGLLSYPEICA 184
G P +L LG+ T W IS + I H + G + + S C
Sbjct: 224 GTPFDRLCLGMKNTTTNWIAVPHEGISLLTLIKKQHTQTSLDVGTWKSLLPGSSLQTGCY 283
Query: 185 KL---INPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKASYV 355
K + N + + PS+ G R+ G GG+W +D ++ GN+A
Sbjct: 284 KQGFNVTSGINSATARIGILAFPSECSGHALSRI--GFGTGGYWYGQDDENSCGNEADTS 341
Query: 356 KT 361
KT
Sbjct: 342 KT 343
>SB_37668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 263 YAFRLPDDXGEGGFWVSYEDPDTAGNKASYVKTKNLGGVSI 385
+ ++ PD +G V+YEDP TA + K+ G SI
Sbjct: 208 WIYKHPDGSSKGECTVTYEDPPTASAAIEWFNGKDFMGQSI 248
>SB_29945| Best HMM Match : DUF125 (HMM E-Value=1.7)
Length = 608
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/55 (21%), Positives = 24/55 (43%)
Frame = -3
Query: 413 TQNHPWKGP*WTHRQGSLFSRN*LCFRPCQDLRKKPRSHLHHXHQEGGRHRSQNV 249
T+ H + W H + ++R + + R PR H H++ G H +++
Sbjct: 256 TRTHARRHAWWEHEKAGTYTRRYIHRKDMAQTRTHPRRHAWREHKKAGTHTRRHM 310
>SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41)
Length = 1017
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 415 PRKI-IHGKVHDGHTAKVLCFHVTSFVSGRVRIFVRNPEATFTXIIRKAEGI 263
PR+I + V G +A L T + GR +IF+RNP F ++ +G+
Sbjct: 618 PRRIRVQTGVSSGASAH-LNVKPTEYAYGRTKIFIRNPRTLFALEEKRKDGM 668
>SB_30230| Best HMM Match : CH (HMM E-Value=0.0035)
Length = 2440
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 302 FWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMD 403
F VS+++PD N + VK+K+ ++DLS D
Sbjct: 1796 FEVSFDEPDVITNMKTKVKSKDTVRKDLLDLSSD 1829
>SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +3
Query: 99 FHRYTPIRVVKLVLIPKFKVY*ATQKFAPNLLTPTKTESVLIFVR 233
F RY P+R KL++ ++ TQ P + +++F R
Sbjct: 523 FTRYNPVRYAKLIVFTRYNPVRYTQLMVFTRYNPVRYAQLMVFTR 567
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/57 (21%), Positives = 26/57 (45%)
Frame = +3
Query: 63 RGSSIQTVKFPEFHRYTPIRVVKLVLIPKFKVY*ATQKFAPNLLTPTKTESVLIFVR 233
R + ++ + F RY P+R +L++ ++ TQ P + +++F R
Sbjct: 180 RYNPVRYTQLMVFTRYNPVRYTQLIVFTRYNPVRYTQLIVFTRYNPVRYTQLIVFTR 236
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/57 (21%), Positives = 27/57 (47%)
Frame = +3
Query: 63 RGSSIQTVKFPEFHRYTPIRVVKLVLIPKFKVY*ATQKFAPNLLTPTKTESVLIFVR 233
R + ++ + F RY P+R ++L++ ++ TQ P + +++F R
Sbjct: 152 RYNPVRYAQLMVFTRYNPVRYLQLLVFTRYNPVRYTQLMVFTRYNPVRYTQLIVFTR 208
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +3
Query: 99 FHRYTPIRVVKLVLIPKFKVY*ATQKFAPNLLTPTKTESVLIFVR 233
F RY P+R +L++ ++ TQ P + +++F R
Sbjct: 206 FTRYNPVRYTQLIVFTRYNPVRYTQLIVFTRYNPVRYAQLMVFTR 250
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/57 (21%), Positives = 27/57 (47%)
Frame = +3
Query: 63 RGSSIQTVKFPEFHRYTPIRVVKLVLIPKFKVY*ATQKFAPNLLTPTKTESVLIFVR 233
R + ++ ++ F RY P+R +L++ ++ TQ P + +++F R
Sbjct: 166 RYNPVRYLQLLVFTRYNPVRYTQLMVFTRYNPVRYTQLIVFTRYNPVRYTQLIVFTR 222
>SB_53508| Best HMM Match : Shugoshin_N (HMM E-Value=6.4)
Length = 221
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 453 RPSGSDIYLQCKDHAKSSMERSMMDTP 373
R G+D+YL+ K + +ERS + +P
Sbjct: 193 RDKGTDVYLRAKHYVDERLERSSLPSP 219
>SB_4707| Best HMM Match : Toxin_17 (HMM E-Value=8.2)
Length = 121
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 388 HDGHTAKVLCFHVTSFVSGRVRIFVRN 308
HDG + +CFH S +R+ V+N
Sbjct: 72 HDGIVPRTICFHKLSCCDDPIRVVVKN 98
>SB_39949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 256 KTFARIVDLTKMRTLSVLVGVNKFGANFWVA 164
K FAR++ T +R + VL+ + FG + W A
Sbjct: 17 KQFARLLIKTPVRIVVVLLSLGLFGVSIWEA 47
>SB_13477| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 628
Score = 27.9 bits (59), Expect = 5.0
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 4 DSKWCAYPQTCPWYQHHWTYVEA 72
D + C+YP T PW WT + +
Sbjct: 80 DERNCSYPTTGPWTTRPWTPISS 102
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = +2
Query: 92 SGVPPIHADKGGEAGPYTK-VQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYA 268
SG+ + G P + G+ YP + + +P Q G P V D ++ +
Sbjct: 326 SGIEGLKGQSGPLGDPGDNGIDGISGYPGVPGRKGDPGQKGDPPRFVPVPDHGEKGQSGE 385
Query: 269 FRLPDDXGEGG 301
P + GE G
Sbjct: 386 PGFPGEIGEAG 396
>SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 915
Score = 27.5 bits (58), Expect = 6.6
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 50 TTGRTWKLDSDSEISGVPPIHADKGGEAGPYT-KVQGLLSYPEI 178
T G+TW E G+P + A GG A P + + +LS +I
Sbjct: 119 TAGKTWNASCFCEGRGMPLVGAVIGGAASPISLNIANVLSVNDI 162
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,291,061
Number of Sequences: 59808
Number of extensions: 382916
Number of successful extensions: 895
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1087245449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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