Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_D19
         (447 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   5.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.0  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    20   9.3  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 295 VQNLGPNGLQNRSKLFV*L*GHTFQILSYTSVKLN 191
           +  L    L + S+L + + G +FQ L YT + LN
Sbjct: 417 IPRLASLNLGHNSQLTLEINGLSFQGLEYTLLHLN 451


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 310  CCTGLVQNLGPNGLQNR 260
            CCT   + L PN L ++
Sbjct: 1365 CCTKKKEELSPNALLDK 1381


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 310  CCTGLVQNLGPNGLQNR 260
            CCT   + L PN L ++
Sbjct: 1365 CCTKKKEELSPNALLDK 1381


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 310  CCTGLVQNLGPNGLQNR 260
            CCT   + L PN L ++
Sbjct: 1365 CCTKKKEELSPNALLDK 1381


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 310  CCTGLVQNLGPNGLQNR 260
            CCT   + L PN L ++
Sbjct: 1365 CCTKKKEELSPNALLDK 1381


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 39  TCIYLILKNIQFW*QHHR 92
           TC+ L  K ++ W Q+ R
Sbjct: 152 TCLRLSEKQVKIWFQNRR 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,011
Number of Sequences: 336
Number of extensions: 1658
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)