Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_D19
         (447 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0961 + 8070992-8071015,8071016-8071089,8073051-8073200,807...    27   6.9  
08_02_0685 + 20039318-20040433,20040574-20040982,20042906-200429...    27   9.1  

>07_01_0961 +
           8070992-8071015,8071016-8071089,8073051-8073200,
           8073307-8073592,8074077-8074220,8074357-8074665
          Length = 328

 Score = 27.1 bits (57), Expect = 6.9
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 324 KFLFYVVLVWFKIWGQMVFKIGQNYLFSYK 235
           KF+    +V+   W  ++  IG  + FSYK
Sbjct: 164 KFIIIKSVVFLTYWQMLIAAIGHQFAFSYK 193


>08_02_0685 +
           20039318-20040433,20040574-20040982,20042906-20042973,
           20043336-20043518,20043641-20043964,20045653-20045694
          Length = 713

 Score = 26.6 bits (56), Expect = 9.1
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = -3

Query: 295 VQNLGPNGLQNRSKLFV*L*GHTFQILSYTSVKLNRFLK 179
           + NLG +  +N   L++ L GH F +  Y +++L RF+K
Sbjct: 661 LMNLGSD-FENMGYLWLAL-GHFFLVAPYAALRLRRFIK 697


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,715,964
Number of Sequences: 37544
Number of extensions: 130826
Number of successful extensions: 162
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 859680288
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)