Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_D18
(227 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2G2.04c |mmf1|pmf1|YjgF family protein Mmf1|Schizosaccharomy... 40 3e-05
SPAC1039.10 |mmf2|hpm1, SPAC922.01|homologous Pmf1p factor 1|Sch... 33 0.004
SPBC577.12 |mug71||endoribonuclease |Schizosaccharomyces pombe|c... 29 0.083
SPBC1347.03 |meu14||sporulation protein Meu14|Schizosaccharomyce... 27 0.33
SPBC342.04 |||adhesion regulating molecule protein homolog|Schiz... 25 1.3
SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|c... 25 1.3
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 24 2.4
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 24 2.4
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 24 3.1
SPBC4.02c |||conserved fungal protein|Schizosaccharomyces pombe|... 24 3.1
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 24 3.1
SPBC1105.10 |rav1||RAVE complex subunit Rav1 |Schizosaccharomyce... 23 4.1
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 23 5.4
SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyce... 23 5.4
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 23 5.4
SPAC26H5.07c |||seven transmembrane receptor-like protein|Schizo... 23 5.4
SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces po... 23 5.4
SPBC13E7.10c |brf1|SPBC30D10.20|transcription factor TFIIIB comp... 23 7.2
SPAC29A4.13 |||urease accessory protein UreF|Schizosaccharomyces... 23 7.2
SPAPB1A10.12c |alo1||D-arabinono-1,4-lactone oxidase|Schizosacch... 23 7.2
SPCC61.01c |str2|str1, SPCC622.20c|siderophore-iron transporter ... 23 7.2
SPBC19C2.09 |sre1||sterol regulatory element binding protein Sre... 22 9.5
SPBC2G2.07c |mug178||mitochondrial ribosomal protein subunit L51... 22 9.5
SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 22 9.5
SPAC14C4.11 |||polyphosphate synthetase |Schizosaccharomyces pom... 22 9.5
>SPBC2G2.04c |mmf1|pmf1|YjgF family protein Mmf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 162
Score = 40.3 bits (90), Expect = 3e-05
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +2
Query: 62 KTIVTSPDVYKPVGPYSQAILSDKTLYISGVLGMDRDAQLVSGGVGAQTRQVLEN 226
KT + SP + GPY+QAI ++ +Y SG + + + +++ G VG QTRQ L N
Sbjct: 39 KTPINSPKL-SSAGPYNQAIKANGVIYCSGQIPV-ANGKVIEGTVGDQTRQCLLN 91
>SPAC1039.10 |mmf2|hpm1, SPAC922.01|homologous Pmf1p factor
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 126
Score = 33.5 bits (73), Expect = 0.004
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 101 GPYSQAILSDKTLYISGVLGMDRDAQLVSGGVGAQTRQVLEN 226
GPY+QA+ S ++ SG + +D V G + QTR +EN
Sbjct: 15 GPYNQAVKSGGLIFCSGQAAV-KDGNFVPGTIQEQTRLTIEN 55
>SPBC577.12 |mug71||endoribonuclease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 606
Score = 29.1 bits (62), Expect = 0.083
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +2
Query: 98 VGPYSQAILSDKTLYISGVLGM 163
+GPYSQ+I ++ ++ISG +G+
Sbjct: 421 IGPYSQSICANGVVFISGQIGL 442
>SPBC1347.03 |meu14||sporulation protein Meu14|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 27.1 bits (57), Expect = 0.33
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 2 IDVLSKMSSTDSTANAHRVVKTIVTSPDVYKPVG 103
I L ++S D + +HR++++ +S + YK G
Sbjct: 31 ISKLKELSHADDSRKSHRIIRSGKSSGEAYKQAG 64
>SPBC342.04 |||adhesion regulating molecule protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 291
Score = 25.0 bits (52), Expect = 1.3
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +2
Query: 2 IDVLSKMSSTDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKTLYISGVLGMDRD 172
ID L D+ N V+ IV+SP + + +SQA+ S + I LG+ D
Sbjct: 208 IDRLMPYMPPDTPNNLEGVL-AIVSSPQYAQALRSFSQALNSPGGVNIISALGLSLD 263
>SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 778
Score = 25.0 bits (52), Expect = 1.3
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
Frame = -1
Query: 152 LPIYRESCQ------IKWLDCRVQPVYRHLGMLQWSSPLCEHL 42
LP YR C+ I W D +Y HLG+ + E+L
Sbjct: 178 LPWYRGECKAALEDTIMWADKTTSCIYEHLGVTVEEQKMIENL 220
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 24.2 bits (50), Expect = 2.4
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = -1
Query: 179 TAHHDPCRVLPIYRESCQIKWLDCRVQPVYRHLGMLQWSSPLCE 48
T+ +P R++ + E+ KW+D +PV G + + S C+
Sbjct: 612 TSEKNPTRIVAL--ENGNTKWMDYLPRPVILVTGSIHFWSIACD 653
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 24.2 bits (50), Expect = 2.4
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +3
Query: 132 RLSIYREYSAWIVMRSWYLVEWEHRRAK 215
R+ + + +AW + + W ++E E RR +
Sbjct: 171 RIRLLAKRTAWEIRKKWKVIEREVRRRR 198
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 23.8 bits (49), Expect = 3.1
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -2
Query: 202 CSHSTRYQLRITIHAEY 152
C+ + YQ++++IHA Y
Sbjct: 166 CNFHSMYQIKLSIHATY 182
>SPBC4.02c |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 456
Score = 23.8 bits (49), Expect = 3.1
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +2
Query: 5 DVLSKMSSTDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKTLYISGVLGMDRD 172
+++ +S+ S N+H TI+ P+ Y P ++ S L+I +G RD
Sbjct: 295 EIMESVSANSSRRNSHDSNSTIICEPE-YPPDTSFNS---SPGRLWIVTAIGRYRD 346
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7
domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1811
Score = 23.8 bits (49), Expect = 3.1
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 155 VLPIYRESCQIKWL 114
VLP++ SC+I WL
Sbjct: 462 VLPVFEISCEIFWL 475
>SPBC1105.10 |rav1||RAVE complex subunit Rav1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1297
Score = 23.4 bits (48), Expect = 4.1
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -3
Query: 219 KTWRVCAPTPPDTNCASRSMPSTPDI 142
K W PP C R +P++P I
Sbjct: 462 KLWHCNEAIPPTLLCTCRQVPTSPII 487
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 23.0 bits (47), Expect = 5.4
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = -1
Query: 224 FLKLGASVLPLHQIPTAHHDPCRVLPIY 141
FL++ +P +++ T H C++ P Y
Sbjct: 1032 FLEIHFDDIPENELETILHKRCKIAPSY 1059
>SPBC20F10.08c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 747
Score = 23.0 bits (47), Expect = 5.4
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 2 IDVLSKMSSTDSTANAHRVVKTIVTSPDVYKPVGPYSQAIL 124
++ LS S+ + + A V KT++ S D Y Y+Q+ L
Sbjct: 495 LEQLSNYSNREISDLAKDVYKTLIQSKDDYSLALSYTQSDL 535
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 23.0 bits (47), Expect = 5.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 198 PTPPDTNCASRSMP 157
PTP TNC +R+ P
Sbjct: 631 PTPTCTNCQTRTTP 644
>SPAC26H5.07c |||seven transmembrane receptor-like
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 505
Score = 23.0 bits (47), Expect = 5.4
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +1
Query: 172 CAVGIWWS 195
C +GIWWS
Sbjct: 192 CLIGIWWS 199
>SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 743
Score = 23.0 bits (47), Expect = 5.4
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +3
Query: 135 LSIYREYSAWIVMRSWYLVEWEHRRAK 215
L YR W ++ Y++ W HR +K
Sbjct: 8 LKKYRLILLWCILGIAYILFWTHRISK 34
>SPBC13E7.10c |brf1|SPBC30D10.20|transcription factor TFIIIB complex
subunit Brf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 500
Score = 22.6 bits (46), Expect = 7.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +1
Query: 184 IWWSGSTDAPSFRK 225
IW G +D PSF K
Sbjct: 287 IWLEGQSDPPSFTK 300
>SPAC29A4.13 |||urease accessory protein UreF|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 235
Score = 22.6 bits (46), Expect = 7.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 71 VTSPDVYKPVGPYSQAILSDKTL 139
VTS DV+K + Y + + S K L
Sbjct: 113 VTSTDVFKYLDEYERRVRSKKAL 135
>SPAPB1A10.12c |alo1||D-arabinono-1,4-lactone
oxidase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 22.6 bits (46), Expect = 7.2
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3
Query: 210 RVCAPTPPD 184
RVCAPTP D
Sbjct: 360 RVCAPTPED 368
>SPCC61.01c |str2|str1, SPCC622.20c|siderophore-iron transporter
Str2 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 597
Score = 22.6 bits (46), Expect = 7.2
Identities = 11/48 (22%), Positives = 21/48 (43%)
Frame = +2
Query: 20 MSSTDSTANAHRVVKTIVTSPDVYKPVGPYSQAILSDKTLYISGVLGM 163
MSS + T + S + K G + ++ +Y+ G+LG+
Sbjct: 387 MSSLTLNVFVFSMTTTAILSGFLMKRFGRFKMLLMISVPMYVLGILGI 434
>SPBC19C2.09 |sre1||sterol regulatory element binding protein
Sre1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 900
Score = 22.2 bits (45), Expect = 9.5
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +1
Query: 43 KCSQSGEDHCNIPRCL 90
K S S ED C+IP L
Sbjct: 218 KLSPSSEDSCSIPETL 233
>SPBC2G2.07c |mug178||mitochondrial ribosomal protein subunit
L51-b|Schizosaccharomyces pombe|chr 2|||Manual
Length = 225
Score = 22.2 bits (45), Expect = 9.5
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 77 SPDVYKPVGPYSQAILSDKTLYISGVLGMDR 169
SPDVY P QAI + K G G R
Sbjct: 24 SPDVYDTKIPILQAITAKKCQRFRGDWGAKR 54
>SPAC2F3.16 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 22.2 bits (45), Expect = 9.5
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3
Query: 63 RPL*HPQMSINRL 101
+PL HPQ+SI RL
Sbjct: 381 KPLDHPQVSIPRL 393
>SPAC14C4.11 |||polyphosphate synthetase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 734
Score = 22.2 bits (45), Expect = 9.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 137 LYISGVLGMDRDAQLVSG 190
LY SG G D+D VSG
Sbjct: 227 LYYSGKQGFDKDQNGVSG 244
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,073,118
Number of Sequences: 5004
Number of extensions: 20644
Number of successful extensions: 64
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 2,362,478
effective HSP length: 55
effective length of database: 2,087,258
effective search space used: 41745160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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