Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_D18
         (227 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   0.83 
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    22   1.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   4.4  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              19   7.8  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.2 bits (45), Expect = 0.83
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = +2

Query: 119 ILSDKTLYISGVLGMDRDAQLVSGGV 196
           ++SD  ++I GV+ +++    V  G+
Sbjct: 406 VISDDNIHIKGVISLNKLTSYVISGI 431


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.8 bits (44), Expect = 1.1
 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
 Frame = -2

Query: 121 NGL--TVGSNRFIDIWGCYNGL 62
           NGL  T   NRF+   G YNGL
Sbjct: 406 NGLHTTTAHNRFLGGIGGYNGL 427


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 19.8 bits (39), Expect = 4.4
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = -1

Query: 101 QPVYRHLGMLQWSSP 57
           QP  R +  +QW  P
Sbjct: 26  QPTQRTMSKIQWRKP 40


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 19.0 bits (37), Expect = 7.8
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = +3

Query: 162 WIVMRSWYLV 191
           W+V   WYL+
Sbjct: 7   WLVSLYWYLI 16


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,749
Number of Sequences: 438
Number of extensions: 1537
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3659655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)