Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_D13
         (587 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_42678| Best HMM Match : Helicase_C (HMM E-Value=1.4e-24)            30   1.2  
SB_58174| Best HMM Match : 3_5_exonuc (HMM E-Value=1e-12)              29   3.7  
SB_59359| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.5  
SB_58940| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.5  
SB_58638| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.5  
SB_56745| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.5  
SB_49627| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.5  
SB_29334| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.5  
SB_5518| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   6.5  
SB_32294| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.5  
SB_31685| Best HMM Match : DUF1540 (HMM E-Value=3.6)                   28   6.5  
SB_29387| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.5  
SB_15958| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.5  
SB_2989| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   6.5  
SB_33494| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.6  
SB_4943| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   8.6  
SB_58034| Best HMM Match : VWA (HMM E-Value=0)                         27   8.6  

>SB_42678| Best HMM Match : Helicase_C (HMM E-Value=1.4e-24)
          Length = 1058

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/56 (28%), Positives = 31/56 (55%)
 Frame = +1

Query: 253 RF*DPTTCQLREFLPAESLHSRIACRRKRDRQRVHGKLVYSR*FQVS**NLCESSK 420
           RF  PT  +++E +PA S+   + CR    +  ++ +L++S+  ++    L E SK
Sbjct: 175 RFIFPTIDKVKETIPARSVEQVVCCRLTALQTAIYKRLIHSKALKI---KLAEGSK 227


>SB_58174| Best HMM Match : 3_5_exonuc (HMM E-Value=1e-12)
          Length = 322

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 506 DLSVIKDGAGINHNVLSVPQEFLFYPQQYFELS 408
           D +++K G GIN +V  + +E+  YP+   +LS
Sbjct: 211 DETIVKVGVGINSDVDKISREYDVYPRGIVDLS 243


>SB_59359| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 99

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 361 FRGLFDDHAFSCRQFVNEVIQQEEIL 284
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 13  YDGTLDAHRKSCRQYQTVIIKQQKVL 38


>SB_58940| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 119

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 361 FRGLFDDHAFSCRQFVNEVIQQEEIL 284
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 32  YDGTLDAHRKSCRQYQTVIIKQQKVL 57


>SB_58638| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 100

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 361 FRGLFDDHAFSCRQFVNEVIQQEEIL 284
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 13  YDGTLDAHRKSCRQYQTVIIKQQKVL 38


>SB_56745| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 100

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 361 FRGLFDDHAFSCRQFVNEVIQQEEIL 284
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 13  YDGTLDAHRKSCRQYQTVIIKQQKVL 38


>SB_49627| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 94

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 361 FRGLFDDHAFSCRQFVNEVIQQEEIL 284
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 13  YDGTLDAHRKSCRQYQTVIIKQQKVL 38


>SB_29334| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 110

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 361 FRGLFDDHAFSCRQFVNEVIQQEEIL 284
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 23  YDGTLDAHRKSCRQYQTVIIKQQKVL 48


>SB_5518| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 118

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 361 FRGLFDDHAFSCRQFVNEVIQQEEIL 284
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 32  YDGTLDAHRKSCRQYQTVIIKQQKVL 57


>SB_32294| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 64

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 361 FRGLFDDHAFSCRQFVNEVIQQEEIL 284
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 13  YDGTLDAHRKSCRQYQTVIIKQQKVL 38


>SB_31685| Best HMM Match : DUF1540 (HMM E-Value=3.6)
          Length = 785

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 361 FRGLFDDHAFSCRQFVNEVIQQEEIL 284
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 110 YDGTLDAHRKSCRQYQTVIIKQQKVL 135


>SB_29387| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 111

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 361 FRGLFDDHAFSCRQFVNEVIQQEEIL 284
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 32  YDGTLDAHRKSCRQYQTVIIKQQKVL 57


>SB_15958| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 100

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 361 FRGLFDDHAFSCRQFVNEVIQQEEIL 284
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 13  YDGTLDAHRKSCRQYQTVIIKQQKVL 38


>SB_2989| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 86

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 361 FRGLFDDHAFSCRQFVNEVIQQEEIL 284
           + G  D H  SCRQ+   +I+Q+++L
Sbjct: 13  YDGTLDAHRKSCRQYQTVIIKQQKVL 38


>SB_33494| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1097

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -1

Query: 536 PSIHTAYHQHDLSVIKDGAGINHNVLSVPQE 444
           PSIH A  + DL+ IK+  G+   + SVP E
Sbjct: 812 PSIHDAAKKGDLARIKELIGVAPAMKSVPDE 842


>SB_4943| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 213

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -1

Query: 560 VDGIQKYRPSIHTAYHQHDLS 498
           VDGI K  P    A+H HD+S
Sbjct: 25  VDGIDKLDPQRRVAFHIHDIS 45


>SB_58034| Best HMM Match : VWA (HMM E-Value=0)
          Length = 1203

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +2

Query: 488  LLLPKGRVGGMPYVLMVYISEFHPPNVSY 574
            ++ PK R+GG+P   +V+I +F   NV+Y
Sbjct: 936  VVAPKERLGGLPLSTLVFIGKF-GKNVNY 963


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,125,713
Number of Sequences: 59808
Number of extensions: 342705
Number of successful extensions: 906
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1422302661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)