Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_D13
(587 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82067-1|CAB63317.1| 794|Caenorhabditis elegans Hypothetical pr... 29 3.2
U61947-5|AAB03134.1| 723|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z19157-2|CAA79568.1| 826|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z98877-9|CAB63405.1| 348|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 27 7.5
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 27 7.5
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 27 7.5
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 27 7.5
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 27 7.5
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 27 7.5
AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol trip... 27 7.5
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 27 7.5
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 27 7.5
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 27 7.5
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 27 7.5
Z81041-1|CAB02786.2| 362|Caenorhabditis elegans Hypothetical pr... 27 9.9
AF045646-10|AAU05566.1| 548|Caenorhabditis elegans Skp1 related... 27 9.9
AF045646-9|AAL32223.1| 660|Caenorhabditis elegans Skp1 related ... 27 9.9
>Z82067-1|CAB63317.1| 794|Caenorhabditis elegans Hypothetical
protein W03H9.1 protein.
Length = 794
Score = 28.7 bits (61), Expect = 3.2
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Frame = +2
Query: 230 LAPKYDSRGFEIPLHVNSENFFLLNHFIHELPAGESVIVKESTEN----LFTVDDFKSAN 397
++PK ++ F+ LH++ ++ + IHE + K+S N L TVD++K
Sbjct: 238 MSPK-ETLIFKAKLHLSEDSLKMSRSLIHEFLGFRVLASKDSVNNLKHSLSTVDNYKI-- 294
Query: 398 EIYVKAQNIVEGKKETLEERTR 463
++ VK + + GK T TR
Sbjct: 295 DVVVK-EKVTVGKATTKHYSTR 315
>U61947-5|AAB03134.1| 723|Caenorhabditis elegans Hypothetical
protein C06G3.4 protein.
Length = 723
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 233 APKYDSRGFEIPLHVNSENFFLLNHFIHELPAGESVIVKESTENLFTV 376
A + D + L SE+ +LN+F+ EL E++ V +STE F V
Sbjct: 274 ALRLDFTYYHKELKAASESVTILNNFLDELFRKETIWVPDSTEWYFIV 321
>Z19157-2|CAA79568.1| 826|Caenorhabditis elegans Hypothetical
protein ZC84.3 protein.
Length = 826
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 467 CDLFPHHLLLPKGRVGGMPYVLMVYISEFHPPNVSYSASE 586
CD P HL++PK RV + Y L + E+ P S +A E
Sbjct: 403 CD--PIHLMVPKARVVLLEY-LTSLLDEYTEPGASINAKE 439
>Z98877-9|CAB63405.1| 348|Caenorhabditis elegans Hypothetical
protein Y69H2.8 protein.
Length = 348
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 262 DPTTCQLREFLPAESLHSRIACRRKRD 342
DP Q+R+ L SL SR++ RR D
Sbjct: 88 DPRAIQIRDLLGPRSLSSRLSSRRNLD 114
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical
protein W06A7.3f protein.
Length = 2488
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 320 LPAGESVIVKES-TENLFTVDDFKSANEIYVKAQNIVE 430
+P E V +S TE +FT D+ K + E KA+N E
Sbjct: 665 IPDSEETTVDDSQTEEIFTDDNVKKSKENTPKAENDTE 702
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical
protein W06A7.3c protein.
Length = 2484
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 320 LPAGESVIVKES-TENLFTVDDFKSANEIYVKAQNIVE 430
+P E V +S TE +FT D+ K + E KA+N E
Sbjct: 665 IPDSEETTVDDSQTEEIFTDDNVKKSKENTPKAENDTE 702
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical
protein W06A7.3a protein.
Length = 2607
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 320 LPAGESVIVKES-TENLFTVDDFKSANEIYVKAQNIVE 430
+P E V +S TE +FT D+ K + E KA+N E
Sbjct: 665 IPDSEETTVDDSQTEEIFTDDNVKKSKENTPKAENDTE 702
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +2
Query: 347 KESTENLFTVDDFKSANEIYVKAQ--NIVEGKKETLEERTRHCDLFPHHLLLPKG-RVGG 517
++ +LF + + +E++V + ++ K+ +ERT DL H L P+ G
Sbjct: 1157 RQIDRDLFILKNLTEKSELWVHGDRHHSIDTKEVDEKERTTEHDLLDHDLKSPRAFDSGD 1216
Query: 518 MPYVLMVYISEFHP 559
LM ++E +P
Sbjct: 1217 SMEALMAVLNEHYP 1230
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +2
Query: 347 KESTENLFTVDDFKSANEIYVKAQ--NIVEGKKETLEERTRHCDLFPHHLLLPKG-RVGG 517
++ +LF + + +E++V + ++ K+ +ERT DL H L P+ G
Sbjct: 1138 RQIDRDLFILKNLTEKSELWVHGDRHHSIDTKEVDEKERTTEHDLLDHDLKSPRAFDSGD 1197
Query: 518 MPYVLMVYISEFHP 559
LM ++E +P
Sbjct: 1198 SMEALMAVLNEHYP 1211
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +2
Query: 347 KESTENLFTVDDFKSANEIYVKAQ--NIVEGKKETLEERTRHCDLFPHHLLLPKG-RVGG 517
++ +LF + + +E++V + ++ K+ +ERT DL H L P+ G
Sbjct: 1194 RQIDRDLFILKNLTEKSELWVHGDRHHSIDTKEVDEKERTTEHDLLDHDLKSPRAFDSGD 1253
Query: 518 MPYVLMVYISEFHP 559
LM ++E +P
Sbjct: 1254 SMEALMAVLNEHYP 1267
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +2
Query: 347 KESTENLFTVDDFKSANEIYVKAQ--NIVEGKKETLEERTRHCDLFPHHLLLPKG-RVGG 517
++ +LF + + +E++V + ++ K+ +ERT DL H L P+ G
Sbjct: 1148 RQIDRDLFILKNLTEKSELWVHGDRHHSIDTKEVDEKERTTEHDLLDHDLKSPRAFDSGD 1207
Query: 518 MPYVLMVYISEFHP 559
LM ++E +P
Sbjct: 1208 SMEALMAVLNEHYP 1221
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +2
Query: 347 KESTENLFTVDDFKSANEIYVKAQ--NIVEGKKETLEERTRHCDLFPHHLLLPKG-RVGG 517
++ +LF + + +E++V + ++ K+ +ERT DL H L P+ G
Sbjct: 1148 RQIDRDLFILKNLTEKSELWVHGDRHHSIDTKEVDEKERTTEHDLLDHDLKSPRAFDSGD 1207
Query: 518 MPYVLMVYISEFHP 559
LM ++E +P
Sbjct: 1208 SMEALMAVLNEHYP 1221
>AF036702-5|AAM98028.1| 1713|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform g protein.
Length = 1713
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +2
Query: 347 KESTENLFTVDDFKSANEIYVKAQ--NIVEGKKETLEERTRHCDLFPHHLLLPKG-RVGG 517
++ +LF + + +E++V + ++ K+ +ERT DL H L P+ G
Sbjct: 1148 RQIDRDLFILKNLTEKSELWVHGDRHHSIDTKEVDEKERTTEHDLLDHDLKSPRAFDSGD 1207
Query: 518 MPYVLMVYISEFHP 559
LM ++E +P
Sbjct: 1208 SMEALMAVLNEHYP 1221
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +2
Query: 347 KESTENLFTVDDFKSANEIYVKAQ--NIVEGKKETLEERTRHCDLFPHHLLLPKG-RVGG 517
++ +LF + + +E++V + ++ K+ +ERT DL H L P+ G
Sbjct: 1157 RQIDRDLFILKNLTEKSELWVHGDRHHSIDTKEVDEKERTTEHDLLDHDLKSPRAFDSGD 1216
Query: 518 MPYVLMVYISEFHP 559
LM ++E +P
Sbjct: 1217 SMEALMAVLNEHYP 1230
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +2
Query: 347 KESTENLFTVDDFKSANEIYVKAQ--NIVEGKKETLEERTRHCDLFPHHLLLPKG-RVGG 517
++ +LF + + +E++V + ++ K+ +ERT DL H L P+ G
Sbjct: 1148 RQIDRDLFILKNLTEKSELWVHGDRHHSIDTKEVDEKERTTEHDLLDHDLKSPRAFDSGD 1207
Query: 518 MPYVLMVYISEFHP 559
LM ++E +P
Sbjct: 1208 SMEALMAVLNEHYP 1221
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +2
Query: 347 KESTENLFTVDDFKSANEIYVKAQ--NIVEGKKETLEERTRHCDLFPHHLLLPKG-RVGG 517
++ +LF + + +E++V + ++ K+ +ERT DL H L P+ G
Sbjct: 1138 RQIDRDLFILKNLTEKSELWVHGDRHHSIDTKEVDEKERTTEHDLLDHDLKSPRAFDSGD 1197
Query: 518 MPYVLMVYISEFHP 559
LM ++E +P
Sbjct: 1198 SMEALMAVLNEHYP 1211
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 27.5 bits (58), Expect = 7.5
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +2
Query: 347 KESTENLFTVDDFKSANEIYVKAQ--NIVEGKKETLEERTRHCDLFPHHLLLPKG-RVGG 517
++ +LF + + +E++V + ++ K+ +ERT DL H L P+ G
Sbjct: 1194 RQIDRDLFILKNLTEKSELWVHGDRHHSIDTKEVDEKERTTEHDLLDHDLKSPRAFDSGD 1253
Query: 518 MPYVLMVYISEFHP 559
LM ++E +P
Sbjct: 1254 SMEALMAVLNEHYP 1267
>Z81041-1|CAB02786.2| 362|Caenorhabditis elegans Hypothetical
protein C27A7.2 protein.
Length = 362
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 115 KLTLNFVHMNRRTDVHISIFVISNQFIYFDLLNXXRRR 2
++ L VH R H+ I+VIS Y+DL+ R+
Sbjct: 121 QIFLMHVHTAHRFGAHMHIYVISIVNAYYDLMKEYERQ 158
>AF045646-10|AAU05566.1| 548|Caenorhabditis elegans Skp1 related
(ubiquitin ligasecomplex component) protein 18, isoform
b protein.
Length = 548
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 347 KESTENLFTVDDFKSANEIYVKAQNIVEGKKETLE 451
+E+TEN DDF++ NE Y+K+ + + ++ LE
Sbjct: 153 QETTENPSGSDDFQAENEKYLKSLDFEKIQEMKLE 187
>AF045646-9|AAL32223.1| 660|Caenorhabditis elegans Skp1 related
(ubiquitin ligasecomplex component) protein 18, isoform
a protein.
Length = 660
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 347 KESTENLFTVDDFKSANEIYVKAQNIVEGKKETLE 451
+E+TEN DDF++ NE Y+K+ + + ++ LE
Sbjct: 153 QETTENPSGSDDFQAENEKYLKSLDFEKIQEMKLE 187
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,047,800
Number of Sequences: 27780
Number of extensions: 266568
Number of successful extensions: 774
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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