Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_D13
         (587 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g45670.1 68415.m05678 calcineurin B subunit-related contains ...    29   2.3  
At2g22300.1 68415.m02646 ethylene-responsive calmodulin-binding ...    29   2.3  
At3g46160.1 68416.m04995 protein kinase-related contains eukaryo...    29   3.0  
At2g07505.1 68415.m00868 hypothetical protein  and genefinder          27   7.0  
At1g79190.1 68414.m09233 expressed protein                             27   7.0  
At3g10870.1 68416.m01309 hydrolase, alpha/beta fold family prote...    27   9.3  
At2g35780.1 68415.m04390 serine carboxypeptidase S10 family prot...    27   9.3  
At2g34180.1 68415.m04183 CBL-interacting protein kinase 13 (CIPK...    27   9.3  

>At2g45670.1 68415.m05678 calcineurin B subunit-related contains
           Pfam PF00036: EF hand domain and Prosite PS00018:
           EF-hand calcium-binding domain; contains Pfam profile
           PF01553: Acyltransferase; weak similarity to Calcineurin
           B subunit isoform 2 (Protein phosphatase 2B regulatory
           subunit 2) (Protein phosphatase 3 regulatory subunit B
           alpha isoform 2) (Swiss-Prot:Q63811) [Mus musculus]
          Length = 539

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
 Frame = +2

Query: 335 SVIVKESTENL-FTVDDFKSANEIYVKAQNIVEGKKETLE-ERTRHCDLFPHHLLLPKGR 508
           +++  ES ++L F     ++   IYV   +    K    E +R   CD FP  LL P+G 
Sbjct: 194 TIVASESHDSLPFVGTIIRAMQVIYVNRFSQTSRKNAVHEIKRKASCDRFPRLLLFPEGT 253

Query: 509 VGGMPYVLMVYISEFHP 559
                 ++   +  F P
Sbjct: 254 TTNGKVLISFQLGAFIP 270


>At2g22300.1 68415.m02646 ethylene-responsive calmodulin-binding
           protein, putative (SR1) identical to partial sequence of
           ethylene-induced calmodulin-binding protein GI:11545505
           from [Arabidopsis thaliana]; contains Pfam profiles
           PF03859: CG-1 domain, PF00612: IQ calmodulin-binding
           motif, and PF00023: Ankyrin repeat
          Length = 1032

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 323 PAGESVIVKESTENLFTVDDFKSANEIYVKAQN 421
           P  E  ++ +  E+ FT+ DF S  E  VK+QN
Sbjct: 308 PNSEHEVLDQILESSFTMQDFASLQESMVKSQN 340


>At3g46160.1 68416.m04995 protein kinase-related contains eukaryotic
           protein kinase domain, INTERPRO:IPR000719
          Length = 393

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 413 AQNIVEGKKETLEERTRHCDLFPHHLLLP 499
           A  I+ G K   EE+  HCD+ P +++LP
Sbjct: 175 ANEILLGLKYIHEEKIIHCDIKPKNIILP 203


>At2g07505.1 68415.m00868 hypothetical protein  and genefinder
          Length = 143

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +2

Query: 332 ESVIVKESTENLFTVDDFKSANEIYVKAQNIVEGKKETLEERTRHCD 472
           + V+V+E  + L  +D+ + A+    K    +E + ETL   TR C+
Sbjct: 52  DEVMVEEMEDILPKIDELEGASLTLQKGLQALEFEMETLAMETRTCE 98


>At1g79190.1 68414.m09233 expressed protein
          Length = 1274

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 5/35 (14%)
 Frame = +2

Query: 422 IVEGKKETLEERTRH-----CDLFPHHLLLPKGRV 511
           +VE  K+ L+  T H     C+ FPH L+ P G++
Sbjct: 389 LVERTKKWLDSTTSHVNKLLCETFPHILIHPAGKI 423


>At3g10870.1 68416.m01309 hydrolase, alpha/beta fold family protein
           similar to ethylene-induced esterase [Citrus sinensis]
           GI:14279437, SP|Q43360 PIR7B protein {Oryza sativa};
           contains Pfam profile PF00561: hydrolase, alpha/beta
           fold family
          Length = 276

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = -3

Query: 486 WCGNKSQCLVRSSRVSFLPSTIF*AFT*ISLADLKSSTVNKFSVDSLT 343
           WC  K +CL+  S            FT ++  DLKSS ++  SVDSLT
Sbjct: 32  WCWYKIKCLMEVS-----------GFT-VTCIDLKSSGIDSSSVDSLT 67


>At2g35780.1 68415.m04390 serine carboxypeptidase S10 family protein
           similar to Serine carboxypeptidase II chains A and B
           (SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)];
          Length = 452

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 296 LLNHFIHELPAGESVIVKESTENLFTVDDFKSANEIYV 409
           L N    E PAG       +T +L+T  D ++A + YV
Sbjct: 120 LANLLFLESPAGVGFSYSNTTSDLYTAGDQRTAEDAYV 157


>At2g34180.1 68415.m04183 CBL-interacting protein kinase 13 (CIPK13)
           identical to CBL-interacting protein kinase 13
           [Arabidopsis thaliana] gi|13249125|gb|AAK16688
          Length = 502

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 16/57 (28%), Positives = 28/57 (49%)
 Frame = +2

Query: 8   SXXIQKVEVDKLVTYYEYTYVNISASVHMNEVQSQLVYDKESVLVQQARLNHKKFNI 178
           S  + K E+ KL+ +  +  V ++ ++H  E  +  V DKE + V+     H K  I
Sbjct: 51  SILMDKYEIGKLLGHGSFAKVYLARNIHSGEDVAIKVIDKEKI-VKSGLAGHIKREI 106


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,076,856
Number of Sequences: 28952
Number of extensions: 240584
Number of successful extensions: 579
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1161268208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)