Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_D10
(441 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1005 + 33723743-33723946,33724035-33724256,33724789-337249... 54 4e-08
01_03_0216 + 13870364-13870472,13871406-13871477,13871603-138716... 53 9e-08
02_02_0418 + 10000744-10000840,10000952-10001023,10001786-100018... 48 3e-06
05_04_0012 + 17145112-17145205,17145681-17145752,17145832-171459... 46 1e-05
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 38 0.004
11_01_0605 + 4821363-4823246 30 0.95
01_06_1626 - 38734128-38734160,38734386-38734560,38734819-387348... 29 1.7
11_01_0606 + 4831102-4833033 29 2.2
03_01_0110 - 865605-866004,866094-866712,867659-867863 29 2.2
06_01_1076 - 8778210-8778734 28 3.8
03_06_0410 - 33728507-33729415,33729511-33729654,33730054-337309... 28 3.8
07_03_0344 - 16976854-16977186,16978920-16979000 27 5.1
05_05_0252 - 23621592-23621912,23621958-23622317,23622979-236230... 27 5.1
05_05_0195 + 23142830-23143714,23144288-23144314,23144657-231448... 27 6.7
05_01_0024 - 164618-165139,166884-166949,167046-167216,167321-16... 27 8.8
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 27 8.8
01_07_0031 - 40603243-40603491,40603617-40603799,40603896-406040... 27 8.8
>01_06_1005 +
33723743-33723946,33724035-33724256,33724789-33724901,
33725581-33725950
Length = 302
Score = 54.4 bits (125), Expect = 4e-08
Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 2/148 (1%)
Frame = +3
Query: 3 LFDVVEKQITDAIADIKVQLKTLEKDGLLRGNL--NADEQFQCVKGTCDLAIAVKDAIFV 176
L D ++ A+ I L+ L G L ++ EQ +CV +L +DA V
Sbjct: 38 LLDSDTAALSRAVDSISSSLRRLVAKGQLSQASCEHSIEQIKCVSSVQEL----RDADLV 93
Query: 177 QECVPENLELKKKVFQNLDNVVDDNTIXXXXXXXXXXXXXXENMKHKAQVIVSHPVNPPY 356
E + E+ ++KKK+F LD + + I QVI H NPP
Sbjct: 94 IEAIVESEDIKKKLFVELDKITKPSAILASNTSSISITRLASATNRPCQVIGMHFFNPPP 153
Query: 357 YVPLVEIVPAPWTKPEVTKKTRAIMEEI 440
+ L+EI+ T EV K ++ E +
Sbjct: 154 IMKLIEIIRGADTSEEVFTKVKSFSERL 181
>01_03_0216 +
13870364-13870472,13871406-13871477,13871603-13871668,
13871767-13871823,13871917-13871984,13872068-13872149,
13872445-13872500,13872645-13872947,13873042-13873128,
13873199-13873373,13873481-13873602,13873689-13873852,
13873925-13874179,13874312-13874433,13874542-13874663,
13875111-13875259,13875346-13875484,13875715-13875750
Length = 727
Score = 53.2 bits (122), Expect = 9e-08
Identities = 35/135 (25%), Positives = 62/135 (45%)
Frame = +3
Query: 3 LFDVVEKQITDAIADIKVQLKTLEKDGLLRGNLNADEQFQCVKGTCDLAIAVKDAIFVQE 182
L +V EK + I IK L++ + G + ++ V G D KD V E
Sbjct: 342 LKEVNEKFLNAGIDRIKANLQSRVRKGKMTEE-RYEKAMSLVTGVLDYE-RFKDVDLVIE 399
Query: 183 CVPENLELKKKVFQNLDNVVDDNTIXXXXXXXXXXXXXXENMKHKAQVIVSHPVNPPYYV 362
V EN++LK+++F +L+ + + E + K +++ +H +P + +
Sbjct: 400 AVIENVKLKQQIFSDLEKYCPSHCVLATNTSTIDLNLIGEKTRSKDRIVGAHFFSPAHVM 459
Query: 363 PLVEIVPAPWTKPEV 407
PL+EIV T P+V
Sbjct: 460 PLLEIVRTQHTSPQV 474
>02_02_0418 +
10000744-10000840,10000952-10001023,10001786-10001848,
10001952-10002008,10002159-10002226,10002327-10002408,
10002517-10002572,10002934-10003236,10003638-10003724,
10004454-10004628,10004813-10004934,10005171-10005334,
10006201-10006455,10006979-10007100,10007220-10007341,
10007452-10007600,10007649-10007652
Length = 665
Score = 48.0 bits (109), Expect = 3e-06
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 4/135 (2%)
Frame = +3
Query: 12 VVEKQITDAIADIKVQLKTLEKDGLL-RGNLNADEQ---FQCVKGTCDLAIAVKDAIFVQ 179
VV K++ ++ +GL+ RG+L D+ +KG D + KD V
Sbjct: 335 VVLKEVNPQFLQRGQKMIAANLEGLVKRGSLTKDKMNKAMSLLKGALDYS-DFKDVDMVI 393
Query: 180 ECVPENLELKKKVFQNLDNVVDDNTIXXXXXXXXXXXXXXENMKHKAQVIVSHPVNPPYY 359
E V E + LK+ +F +L+ V + I E + ++I +H +P +
Sbjct: 394 EAVIEKIPLKQSIFSDLEKVCPPHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHI 453
Query: 360 VPLVEIVPAPWTKPE 404
+PL+EIV T P+
Sbjct: 454 MPLLEIVRTEKTSPQ 468
>05_04_0012 +
17145112-17145205,17145681-17145752,17145832-17145911,
17146059-17146175,17146282-17146363,17147086-17147141,
17147258-17147560,17147658-17147744,17148118-17148292,
17148370-17148491,17149028-17149191,17149277-17149531,
17150419-17150540,17150656-17150777,17151302-17151450,
17151565-17151703,17151831-17151866
Length = 724
Score = 46.0 bits (104), Expect = 1e-05
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Frame = +3
Query: 15 VEKQITDA-IADIKVQLKTLEKDGLLRGNLNADEQFQCVKGTCDLAIAVKDAIFVQECVP 191
V +Q DA I+ +K L++L K G + + + + + G D ++A V E V
Sbjct: 342 VNEQFLDAGISRVKANLQSLVKRGQMTKE-DYENKLSLLSGVLDYE-QFREADVVIEAVI 399
Query: 192 ENLELKKKVFQNLDNVVDDNTIXXXXXXXXXXXXXXENMKHKAQVIVSHPVNPPYYVPLV 371
E+L LK+K+F +L+ N I + + ++ +H +P + +PL+
Sbjct: 400 EDLSLKQKIFADLEKYCHSNCILATNTSTIDLHLIGQKTSCQDRIAGAHFFSPAHAMPLL 459
Query: 372 EIVPAPWTKPEV 407
EI+ T +V
Sbjct: 460 EIIRTHRTSSQV 471
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/90 (24%), Positives = 44/90 (48%)
Frame = +3
Query: 138 CDLAIAVKDAIFVQECVPENLELKKKVFQNLDNVVDDNTIXXXXXXXXXXXXXXENMKHK 317
C LAI + ++ V EN+++K++VF +L+ + + E +
Sbjct: 402 CYLAIYFIEQYWM--AVVENVKVKQQVFADLERYCPSHCVLATNTSTIDLDLIGEKTNSQ 459
Query: 318 AQVIVSHPVNPPYYVPLVEIVPAPWTKPEV 407
++ +H +P + +PL+EIV + T P+V
Sbjct: 460 DRIAGAHFFSPAHVMPLLEIVRSNHTSPQV 489
>11_01_0605 + 4821363-4823246
Length = 627
Score = 29.9 bits (64), Expect = 0.95
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 253 VLSSTTLSKFWNTFFLSSKFSGTHSCTKIASLTAIAKSQVP 131
+LSS +K WNT ++SG H C+ +AS + + +P
Sbjct: 51 ILSSVGSTKNWNTCSNPCQWSGVH-CSSVASSAFVTRLSLP 90
>01_06_1626 -
38734128-38734160,38734386-38734560,38734819-38734878,
38734961-38735059,38735191-38735224,38735315-38735374,
38735596-38735696,38735949-38736014,38736695-38736825,
38736946-38737038,38737273-38737338,38737459-38737494,
38738308-38738382,38738475-38738792
Length = 448
Score = 29.1 bits (62), Expect = 1.7
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -3
Query: 160 LTAIAKSQVPFTHWNCSSAFRFPLRSPSFSKVFN 59
+ +A S++ HW+ A FP+ PS+ K++N
Sbjct: 188 IDTMAYSKLNVLHWHIVDAQSFPIEIPSYPKLWN 221
>11_01_0606 + 4831102-4833033
Length = 643
Score = 28.7 bits (61), Expect = 2.2
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -3
Query: 241 TTLSKFWNTFFLSSKFSGTHSCTKIASLTAIAKSQVP 131
++L+K WNT ++SG H CT AS + + + +P
Sbjct: 61 SSLTKSWNTSSNPCEWSGVH-CTSAASSSFVTRLSLP 96
>03_01_0110 - 865605-866004,866094-866712,867659-867863
Length = 407
Score = 28.7 bits (61), Expect = 2.2
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Frame = +3
Query: 339 PVNPPYYVPL---VEIVPAPWTKPE 404
PV PP Y+ L ++VP PW +PE
Sbjct: 317 PVKPPTYLRLNSKAQLVPNPWRQPE 341
>06_01_1076 - 8778210-8778734
Length = 174
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Frame = +3
Query: 339 PVNPPYYVPL---VEIVPAPWTKPE 404
PV PP Y+ L ++VP PW +PE
Sbjct: 115 PVKPPTYLRLNSKPQLVPNPWRQPE 139
>03_06_0410 -
33728507-33729415,33729511-33729654,33730054-33730920,
33731371-33731913
Length = 820
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 121 WNCSSAFRFPLRSPSFSKVFNCTLISAIASVICFSTTSN 5
+ CSS R P R PS+S + ++ S CF+TTS+
Sbjct: 586 YTCSSVIRTPRRVPSWSCISRENSTGSL-SEDCFATTSS 623
>07_03_0344 - 16976854-16977186,16978920-16979000
Length = 137
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = +3
Query: 300 ENMKHKAQV--IVSHPVNPPYYVPLVEIVPA 386
+ +K+KA + +V+HP NP + P ++++PA
Sbjct: 22 KTLKYKAVLDYLVAHPPNPVFVGPRLDVMPA 52
>05_05_0252 -
23621592-23621912,23621958-23622317,23622979-23623059,
23623262-23623633
Length = 377
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 375 IVPAPWTKPEVTKKTRAIMEE 437
IVPAPW++P K +AI+++
Sbjct: 282 IVPAPWSRPLSEKVIKAILKD 302
>05_05_0195 +
23142830-23143714,23144288-23144314,23144657-23144866,
23144976-23145242,23146290-23146376,23146495-23146553,
23147166-23147768,23148063-23148192,23148570-23149100,
23149636-23149743,23149911-23150456,23150957-23151079,
23151494-23151709
Length = 1263
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -1
Query: 204 VPNFPGRILVRKSHP*RQSLNHRYLSHIGTVHPHLDFPLGVH 79
+ NF G +V+ S + LN + H+G++H +L+ + VH
Sbjct: 349 INNF-GSSVVKFSRS-QAKLNSEIVKHLGSIHEYLEMMISVH 388
>05_01_0024 -
164618-165139,166884-166949,167046-167216,167321-167422,
167538-167600,167679-167825,168234-168359,168742-168921,
169183-169322,169688-169861,170096-170123
Length = 572
Score = 26.6 bits (56), Expect = 8.8
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 339 PVNPPYYVPLVEIVPAPWTKPEVTKKTRAIMEE 437
P+ PP Y+P+ P P + RA++EE
Sbjct: 454 PLQPPMYLPVTPAPPPPPPAFSELEAIRAVLEE 486
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 26.6 bits (56), Expect = 8.8
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +1
Query: 139 VI*RLPLRMRFSYKNASRKIWNSKRKYSKIWTMSSMTTLSYRVQLVQHYR 288
V+ +PL F Y A R + K ++S + + + ++QLV Y+
Sbjct: 715 VVCHVPLNNMFGYSTALRSMTQGKGEFSMEYLEHNTVSQDVQMQLVNTYK 764
>01_07_0031 -
40603243-40603491,40603617-40603799,40603896-40604084,
40604244-40604916,40605583-40605737
Length = 482
Score = 26.6 bits (56), Expect = 8.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 138 CDLAIAVKDAIFVQECVPENLELKKKVFQNLDNVVDD 248
C LA + AI + +CVP +++ +K + N DD
Sbjct: 138 CSLAPCSESAILIADCVPMAMQIFQKAI-STSNAYDD 173
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,856,066
Number of Sequences: 37544
Number of extensions: 201170
Number of successful extensions: 590
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 835800280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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