Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_D09
         (527 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    25   0.48 
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    23   1.5  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    22   3.4  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   3.4  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    22   3.4  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    21   5.9  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 25.0 bits (52), Expect = 0.48
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = +2

Query: 362 QNLLYHLFNIFNNNYLSHEQVITKNLRSRSARFSAGKDS 478
           QNL Y   +  N NY++ EQ +    ++ +  +  GK++
Sbjct: 261 QNLYYSALSSHNLNYVNTEQFVKSQYQANNVHYQ-GKEN 298


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 131 INTNSSYIFWNANV*TNFGQNSNNYN 208
           I+ N++Y   N N   N+  N+NNYN
Sbjct: 90  IHNNNNY---NNNNYNNYNYNNNNYN 112


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 260 NCCNEKHKHQRTEVAS 213
           N CNEK KH   +V +
Sbjct: 73  NKCNEKQKHTANKVVN 88


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/38 (23%), Positives = 17/38 (44%)
 Frame = +2

Query: 362 QNLLYHLFNIFNNNYLSHEQVITKNLRSRSARFSAGKD 475
           QNL Y   +  N NY++ +Q      ++   ++    D
Sbjct: 260 QNLYYSAMSSHNLNYVNTKQFTQGKFQANDIQYQGASD 297



 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 271 KLHYLERTFN*SYQKLYYQWEF 336
           K HY  R F  +  ++ YQW++
Sbjct: 19  KAHYSLRDFKANIFQVKYQWKY 40


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 260 NCCNEKHKHQRTEVAS 213
           N CNEK KH   +V +
Sbjct: 73  NKCNEKQKHTANKVVN 88


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 128 IINTNSSYIFWNANV*TNFGQNSNNYN 208
           II+ N+S +  N N   N+   +NNYN
Sbjct: 81  IISNNNS-LSNNYNYNNNYNNYNNNYN 106


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,016
Number of Sequences: 438
Number of extensions: 3038
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)