Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_D08
         (334 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025825-1|ABF85725.1|  203|Drosophila melanogaster IP06524p pro...    38   0.004
AE014297-1077|AAF54483.1|  203|Drosophila melanogaster CG12811-P...    38   0.004

>BT025825-1|ABF85725.1|  203|Drosophila melanogaster IP06524p
           protein.
          Length = 203

 Score = 37.5 bits (83), Expect = 0.004
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
 Frame = +2

Query: 227 LQKKKEN---RHHVFIPAMCSVNEWYXPGDQK--DDWICDC 334
           + KKK N   R  ++ PA C  ++   PGDQ+  +DW+CDC
Sbjct: 32  IDKKKANLAGRKPLYSPARCPKHQLLYPGDQQKQNDWVCDC 72


>AE014297-1077|AAF54483.1|  203|Drosophila melanogaster CG12811-PA
           protein.
          Length = 203

 Score = 37.5 bits (83), Expect = 0.004
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
 Frame = +2

Query: 227 LQKKKEN---RHHVFIPAMCSVNEWYXPGDQK--DDWICDC 334
           + KKK N   R  ++ PA C  ++   PGDQ+  +DW+CDC
Sbjct: 32  IDKKKANLAGRKPLYSPARCPKHQLLYPGDQQKQNDWVCDC 72


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,224,421
Number of Sequences: 53049
Number of extensions: 236289
Number of successful extensions: 524
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 735339255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)