Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_D08
(334 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g16860.1 68414.m02035 merozoite surface protein-related conta... 31 0.15
At5g25770.2 68418.m03059 expressed protein 26 5.5
At5g25770.1 68418.m03058 expressed protein 26 5.5
At3g01370.1 68416.m00059 expressed protein contains Pfam domain,... 26 5.5
At5g03670.1 68418.m00326 expressed protein 26 7.2
At1g68400.1 68414.m07814 leucine-rich repeat transmembrane prote... 26 7.2
At5g16800.2 68418.m01967 GCN5-related N-acetyltransferase (GNAT)... 25 9.5
At5g16800.1 68418.m01968 GCN5-related N-acetyltransferase (GNAT)... 25 9.5
At2g36560.1 68415.m04484 DNA-binding protein-related contains Pf... 25 9.5
At1g80870.1 68414.m09489 protein kinase family protein contains ... 25 9.5
>At1g16860.1 68414.m02035 merozoite surface protein-related contains
weak similarity to merozoite surface protein [Plasmodium
falciparum] gi|12043655|gb|AAG47601
Length = 474
Score = 31.5 bits (68), Expect = 0.15
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +3
Query: 114 MCFLYNLLIALFLVNVCRAKNSTTDVIG-FPDEE--STKQGYRRRKRTVTTC 260
+ L+ ++ ALF+ N+C + TD I +PD + + K G + V TC
Sbjct: 241 VAILFTVVAALFIWNICWGRRGITDFIARYPDADLRTAKNGQHVKVTGVVTC 292
>At5g25770.2 68418.m03059 expressed protein
Length = 418
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 225 LV*SIPHRENQ*RPSCCFLHGTHSLKTML 139
L+ S+ R + RP+ F+HGT++ K L
Sbjct: 145 LILSLKERSEEKRPAIVFMHGTNTNKEWL 173
>At5g25770.1 68418.m03058 expressed protein
Length = 360
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 225 LV*SIPHRENQ*RPSCCFLHGTHSLKTML 139
L+ S+ R + RP+ F+HGT++ K L
Sbjct: 87 LILSLKERSEEKRPAIVFMHGTNTNKEWL 115
>At3g01370.1 68416.m00059 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 1011
Score = 26.2 bits (55), Expect = 5.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +1
Query: 163 AVQKTARRTLLVFPMRNRLNKVTEEEREPSPRVYSCDV 276
A+++ R+T+++ NK+TE E E PR D+
Sbjct: 474 AIEERRRQTMIMENSSVHGNKLTENEEEIKPRAVKEDI 511
>At5g03670.1 68418.m00326 expressed protein
Length = 516
Score = 25.8 bits (54), Expect = 7.2
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 232 EEEREPSPRVYSCDVFSERVVXT 300
EEE E +Y C++ ++RV+ T
Sbjct: 387 EEEEEEMKSLYHCEIITQRVLKT 409
>At1g68400.1 68414.m07814 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor kinase GB:AAA33715
from [Petunia integrifolia]
Length = 670
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 265 NKHVVTVLFLLL*PCLVDSSSGKPITSVVLF 173
NKH++ L +LL CL+ SSS +++ F
Sbjct: 8 NKHLLLSLLILLQSCLLSSSSSTDSETLLNF 38
>At5g16800.2 68418.m01967 GCN5-related N-acetyltransferase (GNAT)
family protein very low similarity to SP|P39909
Spermine/spermidine acetyltransferase (EC 2.3.1.57)
{Bacillus subtilis}; contains Pfam profile PF00583:
acetyltransferase, GNAT family
Length = 270
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -1
Query: 220 LVDSSSGKPITSVVLFFARHTFTKNNAINKLYKKHIINYVSKIHFIY 80
+V SSG P+ V H NN +LYK+ V ++H Y
Sbjct: 138 VVKYSSGIPVCRGVYL---HVIAHNNPAIRLYKRMSFRCVRRLHGFY 181
>At5g16800.1 68418.m01968 GCN5-related N-acetyltransferase (GNAT)
family protein very low similarity to SP|P39909
Spermine/spermidine acetyltransferase (EC 2.3.1.57)
{Bacillus subtilis}; contains Pfam profile PF00583:
acetyltransferase, GNAT family
Length = 236
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -1
Query: 220 LVDSSSGKPITSVVLFFARHTFTKNNAINKLYKKHIINYVSKIHFIY 80
+V SSG P+ V H NN +LYK+ V ++H Y
Sbjct: 138 VVKYSSGIPVCRGVYL---HVIAHNNPAIRLYKRMSFRCVRRLHGFY 181
>At2g36560.1 68415.m04484 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 574
Score = 25.4 bits (53), Expect = 9.5
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -1
Query: 322 PIIFLISRXIPLVH*THRRNKHVVTVLFL-LL*PCLVDSSSGKPITSVVLFFARHTFTKN 146
P+ +I PL+ + ++ K+V + + P LV SSS +P+ + H+ +N
Sbjct: 214 PVQVVIGSFWPLITNSRQKRKYVSKAMVAPSITPNLVASSSTRPVQQPEMVGPSHSQKRN 273
Query: 145 NAINK 131
+ N+
Sbjct: 274 SESNR 278
>At1g80870.1 68414.m09489 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 692
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +3
Query: 150 LVNVCRAKNSTTDVIGFPDEESTKQGYRRRKRTVTTCLFLRCVQ*TSGIXREIKKMI 320
LV+ CR + +V+ DE+ K GY + + + L L C+Q + ++ +++
Sbjct: 604 LVSWCRQLAQSGNVLELVDEK-LKDGYNKEEAGLCINLALACLQKAPELRPDVSEVV 659
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,391,429
Number of Sequences: 28952
Number of extensions: 113553
Number of successful extensions: 285
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 285
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 390583752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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