Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_D07
         (546 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   2.3  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    22   4.0  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   4.0  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   7.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.3  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   9.3  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 342 EGAADARWMVKGAWIEY 392
           E A D++W V+ A IEY
Sbjct: 412 ELAEDSKWRVRSAIIEY 428



 Score = 21.4 bits (43), Expect = 5.3
 Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
 Frame = +3

Query: 264 WKQRYFVNDSFFD-YKNPGP 320
           W+ RY V D F D  K  GP
Sbjct: 259 WRVRYMVADKFTDLQKAVGP 278


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 168 LGAPGDYDGEKLPSGQWFKQKLDHSN 245
           LG+PGD     + SG+   ++ D +N
Sbjct: 149 LGSPGDASNASIGSGEGTGEEDDDTN 174


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +3

Query: 168 LGAPGDYDGEKLPSGQWFKQKLDHSN 245
           LG+PGD     + SG+   ++ D +N
Sbjct: 305 LGSPGDASNASIGSGEGTGEEDDDTN 330


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 305 QKSWAHISDDRWRRCC*C 358
           +KSW  ++DD  R C  C
Sbjct: 261 EKSWIALNDDYNRLCHLC 278


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 83  HFYYHILLY 109
           HF+Y +LLY
Sbjct: 160 HFFYQLLLY 168


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 416 HKFGTSFLWSQ 448
           H FGT  LWSQ
Sbjct: 90  HFFGTLKLWSQ 100


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,067
Number of Sequences: 336
Number of extensions: 3285
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)