Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_D07
         (546 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    25   0.66 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   3.5  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   4.7  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   4.7  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   4.7  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   4.7  

>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 24.6 bits (51), Expect = 0.66
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +3

Query: 378 AWIEYAKKFKALCINLEHRFYGASHPTDDLSVKN 479
           AW+++ K+ +   IN E+ F+G +  T   +  N
Sbjct: 47  AWMKFDKEGRLRAINPEYGFFGVAPGTSSATNPN 80


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 427 SKFMHRALNFFAYSIQAPFTIHLASAAP 344
           +K MH A N++ +S+     + L S  P
Sbjct: 81  NKSMHTATNYYLFSLAVSDLLLLISGLP 108


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +3

Query: 186 YDGEKLPSGQWFKQKLDHSNPSDLRIWKQRYFVNDSFFDYKNPGPIFLMIG 338
           Y+ E L   QW+  +L +SN S        +  +D +     P   F+M G
Sbjct: 107 YEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWL----PDTYFIMHG 153


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +3

Query: 186 YDGEKLPSGQWFKQKLDHSNPSDLRIWKQRYFVNDSFFDYKNPGPIFLMIG 338
           Y+ E L   QW+  +L +SN S        +  +D +     P   F+M G
Sbjct: 107 YEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWL----PDTYFIMHG 153


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +3

Query: 186 YDGEKLPSGQWFKQKLDHSNPSDLRIWKQRYFVNDSFFDYKNPGPIFLMIG 338
           Y+ E L   QW+  +L +SN S        +  +D +     P   F+M G
Sbjct: 158 YEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWL----PDTYFIMHG 204


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +3

Query: 186 YDGEKLPSGQWFKQKLDHSNPSDLRIWKQRYFVNDSFFDYKNPGPIFLMIG 338
           Y+ E L   QW+  +L +SN S        +  +D +     P   F+M G
Sbjct: 107 YEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWL----PDTYFIMHG 153


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,754
Number of Sequences: 438
Number of extensions: 4019
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)