Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_D04
(583 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10) 80 1e-15
SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083) 79 3e-15
SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23) 62 3e-10
SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 7e-10
SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11) 55 4e-08
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 54 9e-08
SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0) 52 3e-07
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 50 1e-06
SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45) 49 3e-06
SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15) 48 6e-06
SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08) 48 6e-06
SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15) 42 3e-04
SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34) 42 4e-04
SB_9273| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022) 37 0.014
SB_12716| Best HMM Match : E3_binding (HMM E-Value=9.7) 36 0.018
SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11) 36 0.032
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.097
SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_48285| Best HMM Match : Torsin (HMM E-Value=0) 30 1.6
SB_50245| Best HMM Match : RVT_1 (HMM E-Value=1.4e-16) 29 2.1
SB_21856| Best HMM Match : RVT_1 (HMM E-Value=4.5e-32) 29 2.1
SB_33333| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_1686| Best HMM Match : 7tm_1 (HMM E-Value=5.3e-12) 28 4.8
SB_34265| Best HMM Match : rve (HMM E-Value=0.0015) 27 8.5
>SB_3252| Best HMM Match : adh_short (HMM E-Value=4.8e-10)
Length = 289
Score = 79.8 bits (188), Expect = 1e-15
Identities = 43/99 (43%), Positives = 58/99 (58%)
Frame = +2
Query: 263 KVIESLGHFDALVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENKTH 442
K+I+ LG D LVNNA PFL+ + + K F ++V SQI AR+MV+
Sbjct: 109 KLIQRLGRIDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQG 168
Query: 443 GAIVNISSQASKAALKDHAIYSASKAALDALTRAMALEL 559
G I+NI+S L D + Y+A+K AL LT+AMALEL
Sbjct: 169 GRIINITSVHEHTPLPDASAYTAAKHALGGLTKAMALEL 207
>SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083)
Length = 133
Score = 79.0 bits (186), Expect = 3e-15
Identities = 47/106 (44%), Positives = 63/106 (59%), Gaps = 1/106 (0%)
Frame = +2
Query: 212 PSXXXXXXXXADWDKTRKVIESLGHFDALVNNAAVAVCEPFLECSPSNFDKTFDINVKAV 391
PS AD +K +K+IES FD LVNNA A+ E FLE P +FD+ + NV+A
Sbjct: 2 PSIQAVCDDVADIEKMQKLIESQETFDLLVNNAGFAIFESFLEIKPESFDRMHETNVRAP 61
Query: 392 LNISQIVARKMVENKTHGAIVNISSQASKAALKDH-AIYSASKAAL 526
L I+Q VA+KMV GAIVN+SS ++ L + ++ S AAL
Sbjct: 62 LFIAQAVAKKMVAKGEGGAIVNVSSVFTELHLPNSISLGKYSNAAL 107
>SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23)
Length = 228
Score = 62.1 bits (144), Expect = 3e-10
Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 1/101 (0%)
Frame = +2
Query: 266 VIESLGHFDALVNNAA-VAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENKTH 442
V +S G D ++NNA V P E + FDK D+N+K N+ + KM++
Sbjct: 73 VCKSFGPPDFVLNNAGFVNQNAPLWEITAEEFDKVVDVNLKGSANVIRSFLPKMIK-AGK 131
Query: 443 GAIVNISSQASKAALKDHAIYSASKAALDALTRAMALELGP 565
G IVN SS KA A Y A+K ++ LTRA+A+EL P
Sbjct: 132 GVIVNFSSGYGKAGKAKMAPYCATKWGIEGLTRALAMELPP 172
>SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 60.9 bits (141), Expect = 7e-10
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 1/162 (0%)
Frame = +2
Query: 74 KGKRILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHLESLQSEYPSXXXXXXXXADWD 253
K K ++++ R GA ++A L+ L S P D++
Sbjct: 15 KNKVVVLSAAAQGIGKATALACAREGAKVIATDINAEKLKELHS-VPGIETRVVDVTDYE 73
Query: 254 KTRKVIESLGHFDALVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVEN 433
+K + D L N A + + ECS +D T D+NVK++ +++ KM
Sbjct: 74 AIKKFASEVDRVDVLFNCAGLVLGGNIEECSEKQWDLTMDLNVKSMFRMTKECIPKM-RQ 132
Query: 434 KTHGAIVNISSQASK-AALKDHAIYSASKAALDALTRAMALE 556
+ G+I+N++S AS + Y SKAA+ T+A+A +
Sbjct: 133 QGSGSIINMASVASSIKGAPNRFAYGTSKAAVIGFTKAIAAD 174
>SB_44870| Best HMM Match : adh_short (HMM E-Value=5.4e-11)
Length = 236
Score = 55.2 bits (127), Expect = 4e-08
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +2
Query: 257 TRKVIESLGHFDALVNNAAVAVCEP-FLECSPSNFDKTFDINVKAVLNISQIVARKMVEN 433
+++V+ G L+NN+ V F E F+K DIN+K N+ + M+E
Sbjct: 75 SQQVMLDFGAPSLLINNSGVTNKNANFWEVPTEEFNKVVDINIKGTANVLRHFLPSMIEA 134
Query: 434 KTHGAIVNISSQASKAALKDHAIYSASKAALDALTRAMALEL 559
K G IVN +S + + A Y +K AL+ L++A+A EL
Sbjct: 135 KRKGVIVNFTSGWGRCVAPEVAPYCTTKWALEGLSKALAEEL 176
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 54.0 bits (124), Expect = 9e-08
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 9/173 (5%)
Frame = +2
Query: 68 SFKGKRILVTXXXXXXXXXXXXELWRAGANIV-------ALSRTRSHLESLQSEYPSXXX 226
S +G+ +L+T L + G +V AL ++ L +E
Sbjct: 32 SLRGETVLITGAASGIGRLTALILAKKGCKLVLWDINLEALKAVAQEIQDLGAETHYFEC 91
Query: 227 XXXXXADWDKTRKVIES-LGHFDALVNNAAVAVCEPFLECSPSNFDKTFDINVKA-VLNI 400
+ +K +E G+ L+NNA V + FL CS S+ +TF +N A + I
Sbjct: 92 DVRKKDEVEKVANAVEDQAGNVTILINNAGVVTGKKFLNCSESDVMRTFQVNSLAHIWTI 151
Query: 401 SQIVARKMVENKTHGAIVNISSQASKAALKDHAIYSASKAALDALTRAMALEL 559
+ + M +N+ H IV+I+S A L Y ASK A L A+ E+
Sbjct: 152 QRFIPSMMEKNRGH--IVSIASVAGYFGLVGCVDYCASKFAAVGLIEALRREI 202
>SB_27157| Best HMM Match : CLPTM1 (HMM E-Value=0)
Length = 1264
Score = 52.0 bits (119), Expect = 3e-07
Identities = 30/91 (32%), Positives = 50/91 (54%)
Frame = +2
Query: 293 ALVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENKTHGAIVNISSQA 472
A+VNNA + PF + + FD+NV +LN+++ + K+ G IVN++S A
Sbjct: 627 AIVNNAGIGSGGPFDWITVQQMQRVFDVNVWGLLNVTKAFLPLL--KKSCGRIVNVASCA 684
Query: 473 SKAALKDHAIYSASKAALDALTRAMALELGP 565
K + YSASK A+ + + A+ +E+ P
Sbjct: 685 GKLPGPGLSAYSASKYAVQSFSDALRIEMRP 715
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 52.0 bits (119), Expect = 3e-07
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Frame = +2
Query: 263 KVIESLGHFDALVNNAAVAV-CEPFLECSPSN-FDKTFDINVKAVLNISQIVARKMVENK 436
+++E G D LVNNA + + C P EC+ ++ +K F+ NV ++ ++ V M + +
Sbjct: 108 EIVEKEGRIDVLVNNAGIGLFCVP--ECATTDAINKVFEPNVYGLMRMTNAVIPHMKKQR 165
Query: 437 THGAIVNISSQASKAALKDHAIYSASKAALDALTRAMALELG 562
G +VNI S IY ASK A++ AMA LG
Sbjct: 166 A-GHVVNIGSVLGIVGTPFSEIYCASKFAVEGYAEAMAPVLG 206
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 50.4 bits (115), Expect = 1e-06
Identities = 31/95 (32%), Positives = 50/95 (52%)
Frame = +2
Query: 266 VIESLGHFDALVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENKTHG 445
+ E G D LVNNA ++ + S +TF+ N VL +S+ V +M + + G
Sbjct: 78 IYEEEGRIDILVNNAGISHIGMLETQTQSLVKETFNTNFFGVLRMSKAVIPRMKSDHS-G 136
Query: 446 AIVNISSQASKAALKDHAIYSASKAALDALTRAMA 550
I+NISS A + +Y ASK A++ L+ ++A
Sbjct: 137 HIINISSTAGHTGMPFTGLYCASKFAVEGLSESLA 171
>SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45)
Length = 620
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +2
Query: 383 KAVLNISQIVARKMVENK-THGAIVNISSQASKAALKDHAIYSASKAALDALTRAMALEL 559
K + Q A+ MVENK +G+I+NISS +K+ A Y+ASKA ++ LT+ A+EL
Sbjct: 380 KGTFLMCQTTAKAMVENKINNGSIINISSIVAKSGNMGQANYAASKAGVEGLTKVCAIEL 439
>SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15)
Length = 537
Score = 48.0 bits (109), Expect = 6e-06
Identities = 46/159 (28%), Positives = 67/159 (42%), Gaps = 15/159 (9%)
Frame = +2
Query: 137 LWRAGANIVALSRTRSHLESLQSEYPSXXXXXXXXADWDKTRKVI-----ESLGHFDALV 301
L RAGA V + S ++ E+ S D + K E G +A +
Sbjct: 308 LIRAGARAVIVDLPSSEGQNTAQEFGSHCTFIPGHVDSESEIKAAIKVAKEKYGCVNASI 367
Query: 302 NNAAVAVCEPFLECS----PSN-FDKTFDINVKAVLNISQIVARKMVENKT-----HGAI 451
N AA+ E L S P F++T IN N++++VA M N G I
Sbjct: 368 NTAALNTKELTLSESGCPHPLELFEETMKINAVGTFNVARLVAESMATNTPDQEGERGVI 427
Query: 452 VNISSQASKAALKDHAIYSASKAALDALTRAMALELGPL 568
VN+SS Y+A+K A++A+T MA +L L
Sbjct: 428 VNVSSIHGTEGQSGKVAYAATKGAINAMTLPMARDLAKL 466
>SB_50727| Best HMM Match : adh_short (HMM E-Value=8.9e-08)
Length = 272
Score = 48.0 bits (109), Expect = 6e-06
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Frame = +2
Query: 251 DKTRKVIE----SLGHFDALVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVAR 418
+ RK+IE + G D LVNNA+ ++K +N+ +SQ
Sbjct: 78 ETARKLIEDTVTAFGQLDLLVNNASQFCPTESGSVQEETWNKLMGVNLSFPFFLSQAAFP 137
Query: 419 KMVENKTHGAIVNISSQASKAALKDHAIYSASKAALDALTRAMALELGP 565
+ ++HG+I+N+ ++ L +H++Y SKA L T+A+A + P
Sbjct: 138 HL--KRSHGSIINMIDIHAERPLANHSVYCVSKAGLHMCTQALAKDFAP 184
>SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = +2
Query: 335 LECSPSNFDKTFDINVKAVLNISQIVARKM---VENKTHGAIVNISSQASKAALKDHAIY 505
L+ ++ KT +NV+ N+ Q M GA+VN++S ++ A H Y
Sbjct: 142 LDVEEKDWHKTMSVNVQGYANMVQACHPYMKTACNTGPSGAVVNLASISAHRAQPVHWTY 201
Query: 506 SASKAALDALTRAMALEL 559
S+SK A+ ++T+ MAL+L
Sbjct: 202 SSSKGAIISMTKCMALDL 219
>SB_26583| Best HMM Match : adh_short (HMM E-Value=2.4e-15)
Length = 355
Score = 42.3 bits (95), Expect = 3e-04
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Frame = +2
Query: 245 DWDKTRKVIES-LGHF---DALVNNAAVAVCEPFLECSPSNFDKTF-DINVKAVLNISQI 409
++DK +++ S L HF D L+NN+ + +E +K D+N AV+++++
Sbjct: 112 EYDKHTELVRSVLDHFNKIDILINNSGRSQRGLAVETPGIEVEKAMLDLNFLAVVSLTKA 171
Query: 410 VARKMVENKTHGAIVNISSQASKAALKDHAIYSASKAALDALTRAMALELGP 565
V M+E K +G IV SS A K Y+A+K A+ + +EL P
Sbjct: 172 VLPHMIERK-NGHIVVTSSVAGKIGAPMSTSYNATKFAVQGYFDGLRVELFP 222
>SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/87 (31%), Positives = 46/87 (52%)
Frame = +2
Query: 290 DALVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENKTHGAIVNISSQ 469
D LVNNA V + + S + F++N V+ +++ V KM N + G I+NI S
Sbjct: 279 DVLVNNAGVGLIGVLETHTMSLVREMFNVNFFGVVRLTKAVIPKMKGNPS-GHIINIPSI 337
Query: 470 ASKAALKDHAIYSASKAALDALTRAMA 550
+ +AIY +SK A++ + ++A
Sbjct: 338 GGIRGVPFNAIYCSSKFAVEGMAESLA 364
>SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34)
Length = 253
Score = 41.9 bits (94), Expect = 4e-04
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Frame = +2
Query: 272 ESLGHFDALVNNAAVAVCEPFLE-CSPSNFDKTFDINVKAVLNISQIVARKMVENK--TH 442
+ G D LVNNA + + LE + + + F NV + ++M +
Sbjct: 81 QHFGRLDVLVNNAGILETQMRLEQMELARWQRVFATNVFGSFLCCREAIKRMSTRQGGNG 140
Query: 443 GAIVNISSQASK-AALKDHAIYSASKAALDALTRAMALEL 559
GAIVN+SS A++ A ++ Y+A K A+D++T +A E+
Sbjct: 141 GAIVNLSSAAARLGAPGEYIDYAAVKGAIDSMTLGLAKEV 180
>SB_9273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/90 (28%), Positives = 44/90 (48%)
Frame = +2
Query: 296 LVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENKTHGAIVNISSQAS 475
+VNNA +A P F DIN+ ++++++ + + G IVN++S A
Sbjct: 20 VVNNAGIAGVGPVDWIPVERFKHVADINLWGLVDVTKTFL--PLVKRARGRIVNVTSIAG 77
Query: 476 KAALKDHAIYSASKAALDALTRAMALELGP 565
+ L + YS SK +A + A+ EL P
Sbjct: 78 RFTLPFASPYSVSKYGAEAFSDAIRRELAP 107
>SB_13156| Best HMM Match : adh_short (HMM E-Value=0.00022)
Length = 233
Score = 36.7 bits (81), Expect = 0.014
Identities = 23/90 (25%), Positives = 42/90 (46%)
Frame = +2
Query: 296 LVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENKTHGAIVNISSQAS 475
LVNNA V + P + + + ++N+ + +++ + K G +VNISS A
Sbjct: 41 LVNNAGVFIPGPVEWMTVEEYKQIAEVNLWGTVRMTKAFLPLLKREK--GRVVNISSVAG 98
Query: 476 KAALKDHAIYSASKAALDALTRAMALELGP 565
L+ + Y SK + + A+ E+ P
Sbjct: 99 MVPLQRSSAYCISKFGVSVFSDALRREMSP 128
>SB_12716| Best HMM Match : E3_binding (HMM E-Value=9.7)
Length = 133
Score = 36.3 bits (80), Expect = 0.018
Identities = 21/78 (26%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +2
Query: 335 LECSP-SNFDKTFDINVKAVLNISQIVARKMVENKTHGAIVNISSQASKAALKDHAIYSA 511
+E +P S + K D+N+ +++++ + ++ K G +VNISS A + ++ + YS
Sbjct: 5 VELTPLSEYKKMADVNLWGLIDVT-LTFLPLIR-KCGGRVVNISSIAGRLSIPNTGPYSV 62
Query: 512 SKAALDALTRAMALELGP 565
+K ++A + A+ E+ P
Sbjct: 63 TKYGVEAFSDALRREVSP 80
>SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11)
Length = 305
Score = 35.5 bits (78), Expect = 0.032
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 13/114 (11%)
Frame = +2
Query: 266 VIESLGHFDALVNNAAVAVCEPFLECSPSNFDKTFDINVKA-----VLNISQIV-ARKMV 427
V +G LVNNA + + FL+ KT ++N A LN IV + V
Sbjct: 124 VKREVGEVTILVNNAGIVSGKKFLDTEDWMIQKTMEVNTMAHFWILALNPDYIVFTLQTV 183
Query: 428 EN-------KTHGAIVNISSQASKAALKDHAIYSASKAALDALTRAMALELGPL 568
++ K HG +VNI+S A + Y +SK ++ +EL L
Sbjct: 184 KSFLPSMLAKNHGHVVNIASSAGFFGVPGMCDYCSSKFGAVGFDESLRMELSSL 237
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 33.9 bits (74), Expect = 0.097
Identities = 23/89 (25%), Positives = 43/89 (48%)
Frame = +2
Query: 293 ALVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENKTHGAIVNISSQA 472
AL NNA C P S++ + D+N+ V+++S+ + G +VNISS
Sbjct: 258 ALANNAGYGACAPIEWYPLSHYKRMADVNLWGVVDVSKTFL--PLVKMARGRVVNISSIY 315
Query: 473 SKAALKDHAIYSASKAALDALTRAMALEL 559
+ + Y+ +K ++A + +M E+
Sbjct: 316 GFFSPIFGSHYAITKYGVEAFSDSMRREM 344
>SB_27292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 33.5 bits (73), Expect = 0.13
Identities = 25/107 (23%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Frame = +2
Query: 248 WDKTRKVIESLGHFDALVNNAAVAVCEPFLECSP-SNFDKTFDINVKAVLNISQIVARKM 424
+++ ++V+ S A+ NNA P LE P ++ + D+N+ ++++S+
Sbjct: 451 FEQVKRVLPSGTGLWAVYNNAGYMTLAP-LEWFPLDDYKRMADVNLWGLVDVSKTFL--P 507
Query: 425 VENKTHGAIVNISSQASKAALKDHAIYSASKAALDALTRAMALELGP 565
+ G +VN++S A + A YS +K ++A + + E+ P
Sbjct: 508 LVKMARGRVVNVASTVGLIANELTAPYSITKYGVEAFSDVLRREMFP 554
>SB_48285| Best HMM Match : Torsin (HMM E-Value=0)
Length = 636
Score = 29.9 bits (64), Expect = 1.6
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Frame = -1
Query: 454 HYCTMSFVFYHFPGNYLTN---IEHCFNIDIKCFVKVGW*AFEERF---TYSNSSIVHQG 293
H+C M FVF G L N +EH D + K+G EE F + S+ +I +
Sbjct: 504 HFCKMIFVFLSNTGAKLINQHALEHYKLGDER--EKIGLVTLEELFHQISESDPNIWYND 561
Query: 292 IKMSERFDDFTSFVPV 245
+ SE D F F+P+
Sbjct: 562 LLRSEVIDHFVPFLPL 577
>SB_50245| Best HMM Match : RVT_1 (HMM E-Value=1.4e-16)
Length = 311
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 362 KTFDINVKAVLNISQIVARKMVENKTHGAI-VNISSQASKAALKDHAIYSASKAALDALT 538
K + +N L S R +V N+T+ + +NI +Q KAA Y+A K ALD L+
Sbjct: 216 KRWVVNPTPFLRASGGEIRSLVANETYKYLGINIGAQGVKAAE-----YNAFKEALDNLS 270
Query: 539 RA 544
RA
Sbjct: 271 RA 272
>SB_21856| Best HMM Match : RVT_1 (HMM E-Value=4.5e-32)
Length = 583
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 362 KTFDINVKAVLNISQIVARKMVENKTHGAI-VNISSQASKAALKDHAIYSASKAALDALT 538
K + +N L S R +V N+T+ + +NI +Q KAA Y+A K ALD L+
Sbjct: 259 KRWVVNPTPFLRASGGEIRSLVANETYKYLGINIGAQGVKAAE-----YNAFKEALDNLS 313
Query: 539 RA 544
RA
Sbjct: 314 RA 315
>SB_33333| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 484 CSFRSLG*YVHYCTMSFVFYHFPGNYLTNIEHC 386
C + G Y HYC FY P ++T+I+ C
Sbjct: 354 CRHNTAGRYCHYCREG--FYKDPNKHITHIKVC 384
>SB_1686| Best HMM Match : 7tm_1 (HMM E-Value=5.3e-12)
Length = 362
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -1
Query: 451 YCTMSFVFYHFPG-NYLTNIEHCFNIDIKCFVKV 353
YC + + F G +YL NI C +IDI V V
Sbjct: 160 YCVAAIISLRFIGKSYLRNIIFCLHIDIAIVVSV 193
>SB_34265| Best HMM Match : rve (HMM E-Value=0.0015)
Length = 1069
Score = 27.5 bits (58), Expect = 8.5
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = +1
Query: 406 NSCQENGRKQNSWCNSEHIIP 468
N + N + WCN+ H++P
Sbjct: 818 NHARTNSQSGKEWCNNSHVVP 838
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,452,071
Number of Sequences: 59808
Number of extensions: 305583
Number of successful extensions: 662
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1397989795
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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