Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_D04
         (583 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    43   3e-06
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    23   2.9  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   3.8  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   5.1  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   8.9  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 42.7 bits (96), Expect = 3e-06
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
 Frame = +2

Query: 266 VIESLGHFDALVNNAAVAVCEPFLECSPSNFDKTFDINVKAVLNISQIVARKMVENK-TH 442
           V ++LG  D L+NNA + +          ++ K FDIN+  +  + Q V + M +    +
Sbjct: 78  VEKNLGAIDILINNATINIDVTLQNDEVLDWKKIFDINLLGLTCMIQEVLKLMKKKGINN 137

Query: 443 GAIVNISSQASKAAL---KDHAIYSASKAALDALTRAMALEL 559
           G IVNI+  +    L   ++   Y ASK AL  LT  +  EL
Sbjct: 138 GIIVNINDASGLNLLPMNRNRPAYLASKCALTTLTDCLRSEL 179


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 520 CLGCLNSCH 546
           CLGC +SCH
Sbjct: 36  CLGCGDSCH 44


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -2

Query: 564 GPSSKAMARVKASKAALEAL 505
           GPS K +A+  ASKAAL  L
Sbjct: 197 GPSKK-LAKAAASKAALAKL 215


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -3

Query: 248 SRQHQRQQYQ*KGIHSGGSPSEIWSE 171
           + Q  + QYQ   +H  G  + +W++
Sbjct: 278 TEQFVKSQYQANNVHYQGKENILWTQ 303


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 165 LYLGPDLTWRASRVN 209
           LYLG DL W+    N
Sbjct: 116 LYLGGDLDWKYYTTN 130


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,503
Number of Sequences: 438
Number of extensions: 3019
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)