Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_D02
         (580 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    23   2.2  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   2.9  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   2.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   5.0  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   6.7  

>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 87  AAVNSTVLQGGEASVTWISKVIFKRAKCN 1
           A +N+ V+      V W+S  IF R+ C+
Sbjct: 105 AVINTNVIVSHTGEVVWLSHGIF-RSSCD 132


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 309 TTYLTSTWDHCFRNLKIIITRKYMAVLHRP 398
           T Y T+ W     N  +  T   +AVL+RP
Sbjct: 123 TFYKTAAWARLRMNSGMFTTAFSIAVLYRP 152


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 309 TTYLTSTWDHCFRNLKIIITRKYMAVLHRP 398
           T Y T+ W     N  +  T   +AVL+RP
Sbjct: 123 TFYKTAAWARLRMNSGMFTTAFSIAVLYRP 152


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +1

Query: 538 YQLQDHPNVQKCL 576
           YQ++DH +V +C+
Sbjct: 615 YQIRDHKDVTQCI 627


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +2

Query: 101 KINKIVVDFANGVHLSPEYLKLNPQHTVP 187
           ++NK   D+   ++L   Y   NP++ +P
Sbjct: 36  QVNKEECDYYQNLNLGEIYYIYNPRYPLP 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,790
Number of Sequences: 438
Number of extensions: 3319
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)