Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_D01
(496 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical pr... 29 1.9
AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein. 29 1.9
AF039046-14|AAB94214.1| 388|Caenorhabditis elegans Prion-like-(... 28 4.3
U55376-3|AAA98005.3| 525|Caenorhabditis elegans Nuclear hormone... 27 5.7
Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical p... 27 7.5
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z82276-5|CAH60784.1| 261|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z75530-2|CAA99795.2| 351|Caenorhabditis elegans Hypothetical pr... 27 9.9
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ... 27 9.9
AL033510-1|CAA22064.2| 339|Caenorhabditis elegans Hypothetical ... 27 9.9
>Z78059-5|CAJ80820.2| 1099|Caenorhabditis elegans Hypothetical
protein C34B4.1b protein.
Length = 1099
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +2
Query: 233 RMQLWLSQNTNKPQIQNCRIRRQHLHRISTQLQ 331
R++LW+++ + + QN R+R Q+L R +TQLQ
Sbjct: 23 RIRLWVTKRMKELEDQNERLRAQNL-RCTTQLQ 54
>Z70038-7|CAA93886.2| 373|Caenorhabditis elegans Hypothetical
protein ZK1067.7 protein.
Length = 373
Score = 29.1 bits (62), Expect = 1.9
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +3
Query: 345 PNQNDGDECEISDIDQICTHVCGNACTESC*ASSGS 452
P N+ ++C+ I T +C +C C +S G+
Sbjct: 100 PQTNNCNQCQQQCISSCATPICAQSCNNQCSSSCGN 135
>AY084080-1|AAM08090.1| 1099|Caenorhabditis elegans MAX-1A protein.
Length = 1099
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +2
Query: 233 RMQLWLSQNTNKPQIQNCRIRRQHLHRISTQLQ 331
R++LW+++ + + QN R+R Q+L R +TQLQ
Sbjct: 23 RIRLWVTKRMKELEDQNERLRAQNL-RCTTQLQ 54
>AF039046-14|AAB94214.1| 388|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 54
protein.
Length = 388
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/79 (20%), Positives = 26/79 (32%)
Frame = +3
Query: 237 CNYGCHKIRTNHRYRIVGFVDNTYTGYRPNYRRTYTPNQNDGDECEISDIDQICTHVCGN 416
CN C+ +N + Y + Y P N+ ++ C C N
Sbjct: 214 CNSACNSQCSNICQQTAQATQQVYNQNSNTNTQMYNPYNNNNQGSGSANCAPACQPACDN 273
Query: 417 ACTESC*ASSGSPLQGVTA 473
+CT A +P T+
Sbjct: 274 SCTSQTPAPMYNPYDASTS 292
>U55376-3|AAA98005.3| 525|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 45 protein.
Length = 525
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 86 HVPRILMYQYKQLTCTDEMKERLAPAS 6
H+P+ YQY L TDE P+S
Sbjct: 183 HIPQPFDYQYTDLLSTDEQNSSAIPSS 209
>Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical
protein Y69H2.11 protein.
Length = 887
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 360 GDECEISDIDQICTHVCGNACTE 428
GD+C+ SDI T + G CTE
Sbjct: 330 GDKCQYSDICTSATCLYGGTCTE 352
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 366 ECEISDIDQICTHVCGNACTESC*ASSGS 452
+C ++I+ C+ C AC SC S+G+
Sbjct: 65 QCPRAEINSDCSATCVRACIPSCSKSTGN 93
>Z82276-5|CAH60784.1| 261|Caenorhabditis elegans Hypothetical
protein K03D3.11 protein.
Length = 261
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 31 ISSVQVSCLYWYIRIRGTCQTLTRAIPAIILL 126
+SS+Q+S LY++ I GT + + IL+
Sbjct: 84 LSSIQISLLYFFPAIEGTLTKIQNLVIRFILI 115
>Z75530-2|CAA99795.2| 351|Caenorhabditis elegans Hypothetical
protein C47E8.4 protein.
Length = 351
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 153 VTTKARGDTGPVMAVDSHRSIGCDANRGCNYG 248
+ TKA G TGP+ DS + + +YG
Sbjct: 276 IVTKAMGKTGPLFVFDSASDVRIRQDAALDYG 307
>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
protein Y53C10A.9 protein.
Length = 1564
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 486 ECGFRQ*HPEVGFLSSLSRIPYMRY 412
E GFR +P +GFL+ L +I + Y
Sbjct: 1133 EYGFRIFNPSIGFLAGLMKIAALNY 1157
>AL033510-1|CAA22064.2| 339|Caenorhabditis elegans Hypothetical
protein Y40H7A.1 protein.
Length = 339
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Frame = -3
Query: 254 VTTIVASSVGIAAD*PMAINSHNWPSI--------TTGLGSDILTLLLFAVNKMIAGIAL 99
+T + + A + + I S NWP+I GL ++ L L+ ++ + G+
Sbjct: 184 MTEVYYVAASYAVENELGIRSLNWPTIFMVINFALIMGLSFSVILLCLYFIHHKMKGVTY 243
Query: 98 VKVWHVPRILMYQ 60
KV+ + +Y+
Sbjct: 244 SKVYEAVQKQLYR 256
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,279,886
Number of Sequences: 27780
Number of extensions: 228733
Number of successful extensions: 656
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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