Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_C24
         (498 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   2.7  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   6.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.2  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   8.1  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +1

Query: 418 WKMALCFWLHSNP 456
           W+  L  WL+ NP
Sbjct: 656 WRQTLAMWLNHNP 668


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -3

Query: 475 SGGPCPPDSNVTRNTEPSSIS*LC 404
           S GPCPP     +   P ++   C
Sbjct: 49  SKGPCPPQGVDLKRVLPEALQTNC 72



 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 487 SNIWSGGPCPPDSNVTRNT 431
           SN+ S  P PP ++ T  T
Sbjct: 153 SNVISSTPLPPTTSTTTRT 171


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 409 LCPLVFAYPFIIFDV 365
           LC   F Y FIIF V
Sbjct: 111 LCVYYFYYAFIIFTV 125


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = -3

Query: 181 FVTMFCFDYVNLICYLIIITSNWEAFTL--VTKPLN 80
           +VT FC  ++ +I  LI+     +  TL  +TK  N
Sbjct: 49  YVTFFCSLFIVVILKLILAKYRQQDVTLLQITKAKN 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,440
Number of Sequences: 336
Number of extensions: 2589
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)