Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_C24
         (498 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   7.6  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   7.6  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      23   7.6  

>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = +1

Query: 232 SSCGASPTL*ISAYSRARPLFHSVNSGGNLSGYF 333
           SSC  SP         + PL HS     +  GYF
Sbjct: 10  SSCSRSPARRRRIQGHSDPLGHSTPGSFDPQGYF 43


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +2

Query: 254 PYKYRRILAPGL-FSTVLIQGEIFRVI 331
           PY Y R+++PG+  S + +Q    R+I
Sbjct: 129 PYHYERVVSPGIDLSGLTLQSGPSRLI 155


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 157 NQNKTL*RIADENLERSKISIGSKYSSCGASPTL 258
           + NKT    A  NL  S +S G    SC ++PT+
Sbjct: 27  DNNKTNCHCA-RNLSHSLLSFGPFGFSCSSAPTM 59


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 532,331
Number of Sequences: 2352
Number of extensions: 10300
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)