Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_C24
         (498 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006834-10|AAF40005.1|  745|Caenorhabditis elegans Hypothetical...    27   5.7  
U13019-16|AAK84569.1|  311|Caenorhabditis elegans Serpentine rec...    27   7.6  
AF078792-1|AAC26947.2|  352|Caenorhabditis elegans Serpentine re...    27   7.6  
Z78200-5|CAB01584.2|  512|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    27   10.0 
M98552-7|AAK82925.2|  355|Caenorhabditis elegans Hypothetical pr...    27   10.0 
AL132943-4|CAB81975.1|  690|Caenorhabditis elegans Hypothetical ...    27   10.0 

>AC006834-10|AAF40005.1|  745|Caenorhabditis elegans Hypothetical
           protein ZK973.1 protein.
          Length = 745

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +3

Query: 360 PETSKIMNGYAKTNGHSYDMEDGSVFLVTFESGG 461
           P  SKI   + K  G   DM   S++   F+ GG
Sbjct: 345 PGRSKIKTAFLKPTGEVVDMSSFSIYGTRFDGGG 378


>U13019-16|AAK84569.1|  311|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 6 protein.
          Length = 311

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 184 LFVTMFCFDYVNLICYLIIITSNWEAFTLVT 92
           L +  F FDY NLI  L+I    W+ F +++
Sbjct: 253 LHMKTFAFDYSNLIFMLVIFV--WDGFNILS 281


>AF078792-1|AAC26947.2|  352|Caenorhabditis elegans Serpentine
           receptor, class h protein40 protein.
          Length = 352

 Score = 27.1 bits (57), Expect = 7.6
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 205 CAPSSRLLFVTMFCFDYVNLICYLIIITSNWEAFTLVTK 89
           C P+S  L    F     +++   +IITS++ AF +V K
Sbjct: 9   CPPNSSYLASPEFISTGCHIVSVFMIITSSYSAFLIVRK 47


>Z78200-5|CAB01584.2|  512|Caenorhabditis elegans Hypothetical
           protein T04H1.7 protein.
          Length = 512

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 14/50 (28%), Positives = 21/50 (42%)
 Frame = -2

Query: 323 ERFPPELTLWKRGLAREYADIYKVGEAPQDEYFEPIDILLRSKFSSAIRH 174
           +RFP  L +WK     E+    K G     ++   +D+L   K    I H
Sbjct: 321 QRFPDFLFIWKYEKDDEFTQKNKKGNVVFKKFLPQVDLLESRKIKLFITH 370


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 161  KTKHCDE*QTRTWSAARYLLAQNIR 235
            +TKHC   +T TWS+      + IR
Sbjct: 1690 RTKHCPRWKTTTWSSCSVTCGRGIR 1714


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 161  KTKHCDE*QTRTWSAARYLLAQNIR 235
            +TKHC   +T TWS+      + IR
Sbjct: 1690 RTKHCPRWKTTTWSSCSVTCGRGIR 1714


>M98552-7|AAK82925.2|  355|Caenorhabditis elegans Hypothetical
           protein ZK370.7 protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 13/50 (26%), Positives = 28/50 (56%)
 Frame = -3

Query: 274 NTPIFIRSVRRHRTNILSQ*ISCCAPSSRLLFVTMFCFDYVNLICYLIII 125
           +TP +IR+++ +   ++S  I+C    SR+     F F Y + +  ++I+
Sbjct: 240 STPFWIRNMQMYSCGVISASIACLTDFSRISDKGFF-FGYTDKVWAVVIL 288


>AL132943-4|CAB81975.1|  690|Caenorhabditis elegans Hypothetical
           protein Y116F11B.7 protein.
          Length = 690

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -3

Query: 376 IFDVSGILNLELAHKNNPKDFP 311
           I D++ ILNL LA+ +N  DFP
Sbjct: 350 ILDLALILNLSLAYGSNAFDFP 371


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,672,019
Number of Sequences: 27780
Number of extensions: 238090
Number of successful extensions: 509
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 509
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)