Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_C24
         (498 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   4.1  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    21   9.4  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    21   9.4  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   9.4  

>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 33  KYLNNIS*KLINHKCLFSGLVTKVKASQLLV 125
           K +++IS  L+N K  F  L   V A  LLV
Sbjct: 18  KEIHSISDSLVNAKLAFGFLDNSVWADGLLV 48


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -3

Query: 469 GPCPPDSNVTRNTEPSSIS*LC 404
           GPC PD+   +   P ++   C
Sbjct: 54  GPCTPDAAELKRNLPDALENEC 75


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -3

Query: 469 GPCPPDSNVTRNTEPSSIS*LC 404
           GPC PD+   +   P ++   C
Sbjct: 54  GPCTPDAAELKRNLPDALENEC 75


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +3

Query: 165 QNIVTNSRRELGAQQDIYWLKIFV 236
           +++    R++LGA  D  + KI++
Sbjct: 243 EHVAVKMRQDLGASLDTQFKKIYM 266


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,305
Number of Sequences: 438
Number of extensions: 3225
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)