SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_C23
         (480 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7RXT6 Cluster: Predicted protein; n=1; Nematostella ve...    46   6e-04
UniRef50_A7SBY5 Cluster: Predicted protein; n=1; Nematostella ve...    33   3.3  
UniRef50_A7CXR3 Cluster: ABC transporter related; n=1; Opitutace...    33   4.4  
UniRef50_Q0UWQ1 Cluster: Predicted protein; n=1; Phaeosphaeria n...    33   4.4  
UniRef50_Q2FKR0 Cluster: Mucin 2, intestinal/tracheal precursor;...    33   4.4  

>UniRef50_A7RXT6 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 166

 Score = 45.6 bits (103), Expect = 6e-04
 Identities = 25/58 (43%), Positives = 30/58 (51%)
 Frame = -1

Query: 351 YRLRILLDPARIPDYRLQILPGHVRIPDYRHQILPDLVQIPDYHLQILPDPDQNLDHR 178
           YRL+      +I DYRLQ     ++I DYR Q     +QI DY LQI     Q  DHR
Sbjct: 83  YRLQTTDHRLQITDYRLQTTDHRLQITDYRSQTTDYRLQITDYRLQITDYRSQTTDHR 140



 Score = 39.9 bits (89), Expect = 0.029
 Identities = 23/58 (39%), Positives = 28/58 (48%)
 Frame = -1

Query: 351 YRLRILLDPARIPDYRLQILPGHVRIPDYRHQILPDLVQIPDYHLQILPDPDQNLDHR 178
           YRL+      +I DYRLQ     ++I DYR Q     +QI D   QI     Q  DHR
Sbjct: 6   YRLQTADHRLQITDYRLQTTDCRLQITDYRSQTADHRLQITDCRSQITDYRSQTTDHR 63



 Score = 39.5 bits (88), Expect = 0.038
 Identities = 23/58 (39%), Positives = 31/58 (53%)
 Frame = -1

Query: 351 YRLRILLDPARIPDYRLQILPGHVRIPDYRHQILPDLVQIPDYHLQILPDPDQNLDHR 178
           +RL+I    ++  DYRLQI    ++I DYR Q     +QI DY LQ      Q  D+R
Sbjct: 104 HRLQITDYRSQTTDYRLQITDYRLQITDYRSQTTDHRLQITDYRLQTADHRLQITDYR 161



 Score = 37.1 bits (82), Expect = 0.20
 Identities = 23/58 (39%), Positives = 28/58 (48%)
 Frame = -1

Query: 351 YRLRILLDPARIPDYRLQILPGHVRIPDYRHQILPDLVQIPDYHLQILPDPDQNLDHR 178
           YRL+      +I DYR Q     ++I DYR QI     Q  D+ LQI     Q  DHR
Sbjct: 97  YRLQTTDHRLQITDYRSQTTDYRLQITDYRLQITDYRSQTTDHRLQITDYRLQTADHR 154



 Score = 36.7 bits (81), Expect = 0.27
 Identities = 22/58 (37%), Positives = 29/58 (50%)
 Frame = -1

Query: 351 YRLRILLDPARIPDYRLQILPGHVRIPDYRHQILPDLVQIPDYHLQILPDPDQNLDHR 178
           YRL+      +I DYR Q     ++I D R QI     Q  D+ LQI  +  Q +DHR
Sbjct: 20  YRLQTTDCRLQITDYRSQTADHRLQITDCRSQITDYRSQTTDHRLQITDNRLQTIDHR 77



 Score = 36.3 bits (80), Expect = 0.36
 Identities = 20/46 (43%), Positives = 25/46 (54%)
 Frame = -1

Query: 351 YRLRILLDPARIPDYRLQILPGHVRIPDYRHQILPDLVQIPDYHLQ 214
           YRL+I     +I DYR Q     ++I DYR Q     +QI DY LQ
Sbjct: 118 YRLQITDYRLQITDYRSQTTDHRLQITDYRLQTADHRLQITDYRLQ 163



 Score = 34.3 bits (75), Expect = 1.4
 Identities = 21/58 (36%), Positives = 30/58 (51%)
 Frame = -1

Query: 351 YRLRILLDPARIPDYRLQILPGHVRIPDYRHQILPDLVQIPDYHLQILPDPDQNLDHR 178
           +RL+I    ++I DYR Q     ++I D R Q +   +QI DY LQ      Q  D+R
Sbjct: 41  HRLQITDCRSQITDYRSQTTDHRLQITDNRLQTIDHRLQITDYRLQTTDHRLQITDYR 98



 Score = 34.3 bits (75), Expect = 1.4
 Identities = 21/58 (36%), Positives = 28/58 (48%)
 Frame = -1

Query: 351 YRLRILLDPARIPDYRLQILPGHVRIPDYRHQILPDLVQIPDYHLQILPDPDQNLDHR 178
           YR +      +I D RLQ +   ++I DYR Q     +QI DY LQ      Q  D+R
Sbjct: 55  YRSQTTDHRLQITDNRLQTIDHRLQITDYRLQTTDHRLQITDYRLQTTDHRLQITDYR 112



 Score = 34.3 bits (75), Expect = 1.4
 Identities = 21/57 (36%), Positives = 28/57 (49%)
 Frame = -1

Query: 348 RLRILLDPARIPDYRLQILPGHVRIPDYRHQILPDLVQIPDYHLQILPDPDQNLDHR 178
           RL+ +    +I DYRLQ     ++I DYR Q     +QI DY  Q      Q  D+R
Sbjct: 70  RLQTIDHRLQITDYRLQTTDHRLQITDYRLQTTDHRLQITDYRSQTTDYRLQITDYR 126



 Score = 33.9 bits (74), Expect = 1.9
 Identities = 20/58 (34%), Positives = 31/58 (53%)
 Frame = -1

Query: 351 YRLRILLDPARIPDYRLQILPGHVRIPDYRHQILPDLVQIPDYHLQILPDPDQNLDHR 178
           +RL+I  +  +  D+RLQI    ++  D+R QI    +Q  D+ LQI     Q  D+R
Sbjct: 62  HRLQITDNRLQTIDHRLQITDYRLQTTDHRLQITDYRLQTTDHRLQITDYRSQTTDYR 119



 Score = 33.1 bits (72), Expect = 3.3
 Identities = 21/57 (36%), Positives = 29/57 (50%)
 Frame = -1

Query: 348 RLRILLDPARIPDYRLQILPGHVRIPDYRHQILPDLVQIPDYHLQILPDPDQNLDHR 178
           RL+I    ++  D+RLQI     +I DYR Q     +QI D  LQ +    Q  D+R
Sbjct: 28  RLQITDYRSQTADHRLQITDCRSQITDYRSQTTDHRLQITDNRLQTIDHRLQITDYR 84


>UniRef50_A7SBY5 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 172

 Score = 33.1 bits (72), Expect = 3.3
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
 Frame = -1

Query: 318 IPDYRLQILP--GHVRIPDYRHQILPD--LVQIPDYHLQILPD 202
           +PDY    +P  G+  +PDY +  +PD     +PDY    +PD
Sbjct: 50  VPDYGYTSVPDYGYTSVPDYGYTCVPDYGYTSVPDYGFTSVPD 92


>UniRef50_A7CXR3 Cluster: ABC transporter related; n=1; Opitutaceae
           bacterium TAV2|Rep: ABC transporter related -
           Opitutaceae bacterium TAV2
          Length = 615

 Score = 32.7 bits (71), Expect = 4.4
 Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
 Frame = -1

Query: 327 PARIPDYRLQILPGHVRIPDYRH-QILPDLVQIPDYHLQILPDPDQNLDHRCPGHRVLV* 151
           PA +P+ R +  PG +  P +R  +  P    IPD   ++L DP Q++  R  GHR  + 
Sbjct: 158 PAALPNPRPRAAPG-LGAPHHRRARRRPAHADIPDLPRRVLSDPVQHVSRR-EGHRPALP 215

Query: 150 NLGCYL---QIHP 121
            LG  +   ++HP
Sbjct: 216 RLGPRIWSERVHP 228


>UniRef50_Q0UWQ1 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 436

 Score = 32.7 bits (71), Expect = 4.4
 Identities = 15/39 (38%), Positives = 27/39 (69%)
 Frame = +1

Query: 238 DKVREDLVAVIRDTDMAREDLEAVIRDSGRVKEDSKTVT 354
           +KVR+DL+A+ R   + R+D EA+ ++  R+K+D +  T
Sbjct: 149 EKVRQDLLALRRAEQVLRKDSEALRKEIARLKKDVQIQT 187


>UniRef50_Q2FKR0 Cluster: Mucin 2, intestinal/tracheal precursor; n=2;
            cellular organisms|Rep: Mucin 2, intestinal/tracheal
            precursor - Methanospirillum hungatei (strain JF-1 / DSM
            864)
          Length = 2353

 Score = 32.7 bits (71), Expect = 4.4
 Identities = 11/44 (25%), Positives = 23/44 (52%)
 Frame = -1

Query: 330  DPARIPDYRLQILPGHVRIPDYRHQILPDLVQIPDYHLQILPDP 199
            +P   P+Y  ++ P     P+Y  ++ P+    P+Y  ++ P+P
Sbjct: 1117 EPTVTPEYGEEVTPEPTVTPEYGEEVTPEPTVTPEYGEEVTPEP 1160


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 287,273,776
Number of Sequences: 1657284
Number of extensions: 4734561
Number of successful extensions: 13323
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13300
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27290400475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -