Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_C23
         (480 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113616-1|AAM29621.1|  112|Drosophila melanogaster RH63170p pro...    30   1.4  
AE014298-2542|AAF48711.1|  133|Drosophila melanogaster CG5172-PA...    28   7.6  

>AY113616-1|AAM29621.1|  112|Drosophila melanogaster RH63170p
           protein.
          Length = 112

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 21/49 (42%), Positives = 25/49 (51%)
 Frame = +2

Query: 110 WTRPGWIWR*QPRF*TRTR*PGHR*SRFWSGSGRIWRW*SGIWTRSGRI 256
           WTRPGW W    R  TR + P    +R  +G  R  R  +G WTR  RI
Sbjct: 38  WTRPGWTW--SARIRTRWKWP----TRIRTGWTRPARIRTG-WTRPARI 79


>AE014298-2542|AAF48711.1|  133|Drosophila melanogaster CG5172-PA,
           isoform A protein.
          Length = 133

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = +2

Query: 125 WIWR*QPRF*TRTR*PGHR*SRFWSGSGRIWRW*SGIWTRSGRIWWR 265
           W WR  PR     R       R+W+   R+WRW S  W R  R  WR
Sbjct: 78  WTWRRWPRRLAEER------RRWWTR--RLWRWQSR-WPRRTRRLWR 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,143,538
Number of Sequences: 53049
Number of extensions: 198607
Number of successful extensions: 524
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)