Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_C22
(545 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 159 5e-38
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 157 2e-37
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 150 2e-35
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 149 4e-35
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 128 1e-28
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 122 4e-27
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 120 2e-26
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 110 2e-23
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 101 1e-20
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 101 1e-20
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 98 1e-19
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 94 2e-18
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 88 1e-16
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 79 5e-14
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 73 6e-12
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 57 3e-07
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 51 2e-05
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 46 8e-04
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 45 0.001
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 45 0.001
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 44 0.002
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 42 0.012
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 42 0.012
UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1; Nanoarc... 40 0.038
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 39 0.066
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 38 0.15
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 38 0.20
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 37 0.35
UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus ... 37 0.35
UniRef50_Q5DFQ5 Cluster: SJCHGC04650 protein; n=1; Schistosoma j... 36 0.46
UniRef50_Q7VKW9 Cluster: Possible uroporphyrinogen III synthase;... 35 1.1
UniRef50_Q8SWQ3 Cluster: Putative uncharacterized protein ECU01_... 35 1.1
UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus ... 35 1.1
UniRef50_A4BZ73 Cluster: Putative uncharacterized protein; n=1; ... 33 4.3
UniRef50_O86476 Cluster: Clumping factor B precursor; n=31; Stap... 33 5.7
UniRef50_Q981I1 Cluster: Transposase; n=4; Rhizobiales|Rep: Tran... 32 7.5
UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2; Desulfu... 32 7.5
UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5; Thermop... 32 7.5
UniRef50_Q8YQA8 Cluster: Alr3925 protein; n=5; Nostocaceae|Rep: ... 32 9.9
UniRef50_Q08TN9 Cluster: Putative uncharacterized protein; n=1; ... 32 9.9
UniRef50_A5N0X0 Cluster: Putative uncharacterized protein; n=1; ... 32 9.9
UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4; Actin... 32 9.9
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 159 bits (385), Expect = 5e-38
Identities = 76/106 (71%), Positives = 85/106 (80%)
Frame = +2
Query: 23 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 202
MKLNVS+PATG QK FEV+D+HKLR FY+KRMGAE+ AD LGDEWKGYV ++AGGNDKQG
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 203 FPMKQGVLTNSRVRLLMSKATLLATDHVVTVRGKRKSVRGCIVDAN 340
FPMKQGVLTN+RVRLL+ K R KRKSVRGCIVD N
Sbjct: 61 FPMKQGVLTNTRVRLLLKKGHSCYRPRRTGER-KRKSVRGCIVDQN 105
Score = 83.8 bits (198), Expect = 2e-15
Identities = 39/55 (70%), Positives = 46/55 (83%)
Frame = +3
Query: 378 RKGAQEIPGLTDGEVPRRLGPKRASKIRKLFTLKKEDDVRRYVVKRLLPAKEGRK 542
+KG ++IPGLTD V RRLGPKRAS IRKL+ L KEDDVR+YVVKR LP K+G+K
Sbjct: 115 KKGEKDIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYVVKRPLPEKDGKK 169
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 157 bits (380), Expect = 2e-37
Identities = 76/106 (71%), Positives = 84/106 (79%)
Frame = +2
Query: 23 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 202
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 203 FPMKQGVLTNSRVRLLMSKATLLATDHVVTVRGKRKSVRGCIVDAN 340
FPMKQGVLT+ RVRLL+SK R KRKSVRGCIVDAN
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGER-KRKSVRGCIVDAN 105
Score = 81.4 bits (192), Expect = 1e-14
Identities = 39/55 (70%), Positives = 47/55 (85%)
Frame = +3
Query: 378 RKGAQEIPGLTDGEVPRRLGPKRASKIRKLFTLKKEDDVRRYVVKRLLPAKEGRK 542
+KG ++IPGLTD VPRRLGPKRAS+IRKLF L KEDDVR+YVV++ L KEG+K
Sbjct: 115 KKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGKK 168
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 150 bits (364), Expect = 2e-35
Identities = 76/106 (71%), Positives = 84/106 (79%)
Frame = +2
Query: 23 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 202
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 203 FPMKQGVLTNSRVRLLMSKATLLATDHVVTVRGKRKSVRGCIVDAN 340
FPMKQGVLT+ R+RLL K VR K K+VR V+AN
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVR-KCKTVRKYTVEAN 104
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 149 bits (361), Expect = 4e-35
Identities = 69/105 (65%), Positives = 79/105 (75%)
Frame = +2
Query: 23 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 202
MKLN+SYP TGCQKL E+ DE K+R FY+KRM EV + LGDEWKGYV R+ GGNDKQG
Sbjct: 1 MKLNISYPVTGCQKLIEIEDERKVRSFYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQG 60
Query: 203 FPMKQGVLTNSRVRLLMSKATLLATDHVVTVRGKRKSVRGCIVDA 337
FPMKQG++TN RVRLL+SK R KRKSVRGCIVD+
Sbjct: 61 FPMKQGIMTNGRVRLLLSKGHSCYRPRRTGER-KRKSVRGCIVDS 104
Score = 89.0 bits (211), Expect = 6e-17
Identities = 38/55 (69%), Positives = 46/55 (83%)
Frame = +3
Query: 378 RKGAQEIPGLTDGEVPRRLGPKRASKIRKLFTLKKEDDVRRYVVKRLLPAKEGRK 542
+KG Q+IPGLTD +PRRLGPKR KIRK+F L KEDDVR+YV++R LP KEG+K
Sbjct: 115 KKGEQDIPGLTDNTIPRRLGPKRVGKIRKMFNLSKEDDVRQYVIRRPLPEKEGKK 169
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 128 bits (308), Expect = 1e-28
Identities = 61/103 (59%), Positives = 73/103 (70%)
Frame = +2
Query: 23 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 202
MK N+SYP TG QK E+ D+ K IF +K+MG EV+ D LGDE+KGYV ++AGGNDK G
Sbjct: 1 MKFNISYPLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDG 60
Query: 203 FPMKQGVLTNSRVRLLMSKATLLATDHVVTVRGKRKSVRGCIV 331
FPMKQGV+ RVRLL+S+ T R KRKSVRGCIV
Sbjct: 61 FPMKQGVMVRGRVRLLLSEGHSCFTSRRSGFR-KRKSVRGCIV 102
Score = 59.3 bits (137), Expect = 6e-08
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 3/57 (5%)
Frame = +3
Query: 378 RKGAQEIPGLTDGEVPRRLGPKRASKIRKLFTLKKEDD---VRRYVVKRLLPAKEGR 539
+KG EI GLT +PR+LGPKRA+ I+KLF LKKEDD +++ V++R +G+
Sbjct: 115 KKGVAEIDGLTTVTLPRKLGPKRANNIKKLFGLKKEDDPILIKKSVIRRTFKTAKGK 171
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 122 bits (295), Expect = 4e-27
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +2
Query: 23 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 202
MKLN+S+PATGCQKL E DE K R FYEK M +EV AD LG+EWKGY++R++GGNDKQG
Sbjct: 1 MKLNISFPATGCQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQG 60
Query: 203 FPMKQGVLTNSRVRLLM 253
FPMKQ VLT+ R+ LL+
Sbjct: 61 FPMKQDVLTHDRIHLLL 77
Score = 58.8 bits (136), Expect = 8e-08
Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 9/60 (15%)
Frame = +3
Query: 390 QEIPGLTDGEVPRRLGPKRASKIRKLFTLKKEDD---------VRRYVVKRLLPAKEGRK 542
++IPGLTD PR +GPKRAS+IRKLF L KEDD +R+ + KR+ AKE R+
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSKEDDAAQNSILRKIRKRIYKRMKEAKEKRQ 139
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 120 bits (290), Expect = 2e-26
Identities = 59/103 (57%), Positives = 72/103 (69%)
Frame = +2
Query: 23 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 202
MK N+SYP TG QK E+ D+ K IF++KRMG V+AD LG+E+KGYVL++ GGNDKQG
Sbjct: 1 MKFNISYPLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQG 60
Query: 203 FPMKQGVLTNSRVRLLMSKATLLATDHVVTVRGKRKSVRGCIV 331
FPM+QGVL RVR+LM K KRKS+RGCIV
Sbjct: 61 FPMRQGVLFKGRVRILMRKGHKGYRPR-KDGEMKRKSIRGCIV 102
Score = 62.5 bits (145), Expect = 6e-09
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
Frame = +3
Query: 378 RKGAQEIPGLTDGEVPRRLGPKRASKIRKLFTLKKEDD---VRRYVVKRLLPAKEGRK 542
+KGA EI GLTD VPRRLGPKR +K+R+LF KK D V++ +++R K+G+K
Sbjct: 115 KKGANEIAGLTDQNVPRRLGPKRLTKLRRLFGFKKADGVAIVQKNLIRRTWTTKDGKK 172
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 110 bits (265), Expect = 2e-23
Identities = 58/106 (54%), Positives = 68/106 (64%)
Frame = +2
Query: 14 IAVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGND 193
I MKLN+S P QK E+ DE KL F EKR+G V D +G+E+ GYV R+ GGND
Sbjct: 39 IQKMKLNISNPLNNVQKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGND 98
Query: 194 KQGFPMKQGVLTNSRVRLLMSKATLLATDHVVTVRGKRKSVRGCIV 331
KQGFPM QGVLTN+RVRLL K + +RKSVRGCIV
Sbjct: 99 KQGFPMMQGVLTNNRVRLLFKKGMKCYRPRKKGEK-RRKSVRGCIV 143
Score = 71.7 bits (168), Expect = 1e-11
Identities = 34/57 (59%), Positives = 44/57 (77%)
Frame = +3
Query: 369 SLSRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFTLKKEDDVRRYVVKRLLPAKEGR 539
+L +KG EIPGLTD V ++LGPKRA+KIRKLF L K DDVR+YV+ R + +K G+
Sbjct: 153 TLVKKGTNEIPGLTDKAVGKKLGPKRATKIRKLFNLDKTDDVRKYVIGRAI-SKNGK 208
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 101 bits (241), Expect = 1e-20
Identities = 47/105 (44%), Positives = 71/105 (67%), Gaps = 2/105 (1%)
Frame = +2
Query: 23 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 202
MK N++ P+TG Q E+ DE KLRI Y K++ +++D ++G EW + + GG DKQG
Sbjct: 1 MKFNIANPSTGVQHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQG 60
Query: 203 FPMKQGVLTNSRVRLLMSKATLLATDHVVTVRGK--RKSVRGCIV 331
FPMK+G+L+ SRV++L+ K + + + +G+ RKSVRGCIV
Sbjct: 61 FPMKEGILSPSRVKILLKKGSTGCRGYKMK-KGERCRKSVRGCIV 104
Score = 31.9 bits (69), Expect = 9.9
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 405 LTDGEVPRRLGPKRASKIRKLFTLKKEDDVRRYVVK 512
+T+ + L KR+S +RK+ L K DD+R++ +K
Sbjct: 125 ITNKNSEKTLTHKRSSNLRKVLCLTKTDDIRKHYIK 160
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 101 bits (241), Expect = 1e-20
Identities = 52/102 (50%), Positives = 67/102 (65%)
Frame = +2
Query: 26 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGF 205
K+NV+YPATG K F+ +E R F +KR+G EVDA LGDE+KGY+L++ GG DK GF
Sbjct: 1 KINVAYPATGRIKKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGF 60
Query: 206 PMKQGVLTNSRVRLLMSKATLLATDHVVTVRGKRKSVRGCIV 331
PM GV TN+RVRLL+ + +RK+VRG IV
Sbjct: 61 PMMTGVATNNRVRLLLDGRN-GCYKPLRNGERRRKTVRGAIV 101
Score = 56.0 bits (129), Expect = 5e-07
Identities = 23/46 (50%), Positives = 35/46 (76%)
Frame = +3
Query: 378 RKGAQEIPGLTDGEVPRRLGPKRASKIRKLFTLKKEDDVRRYVVKR 515
+KG EI G+T+ +P R GP+RAS RKLF L ++DDV+++V++R
Sbjct: 114 KKGEGEIEGVTNDALPMRAGPQRASHFRKLFNLSQKDDVKKFVIRR 159
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 97.9 bits (233), Expect = 1e-19
Identities = 45/103 (43%), Positives = 66/103 (64%)
Frame = +2
Query: 23 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 202
M++ ++YP G Q + ++ D L YEKR+G +++ + LG ++KGY+ R+ GG DKQG
Sbjct: 1 MRITLAYPENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQG 60
Query: 203 FPMKQGVLTNSRVRLLMSKATLLATDHVVTVRGKRKSVRGCIV 331
FPMKQGV+T R+RLL+ R KRK+VRGCI+
Sbjct: 61 FPMKQGVITPRRIRLLLKTGASCYRPRKDGER-KRKTVRGCII 102
Score = 45.6 bits (103), Expect = 8e-04
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +3
Query: 378 RKGAQEIPGLTDGEVPRRLGPKRASKIRKLFTL-KKEDDVRRYVVKR 515
+KG +EI GLT VPRR GPKRAS +R +F + + D + V+KR
Sbjct: 115 QKGEKEIDGLTTTAVPRRFGPKRASTLRAMFGITDSKFDASKLVLKR 161
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 94.3 bits (224), Expect = 2e-18
Identities = 47/105 (44%), Positives = 66/105 (62%), Gaps = 2/105 (1%)
Frame = +2
Query: 23 MKLNVSYPATGCQKLFEVVDEHKLRI-FYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQ 199
MKLN++YP G K FE+ DE R+ + R+G EVD + G E+KGY+ R+ GG+DK
Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKD 60
Query: 200 GFPMKQGVLTNSRVRLLMSKATL-LATDHVVTVRGKRKSVRGCIV 331
GFPM GVL +SRV LL+ + + T +RK+VRGC++
Sbjct: 61 GFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVL 105
Score = 70.9 bits (166), Expect = 2e-11
Identities = 34/58 (58%), Positives = 44/58 (75%)
Frame = +3
Query: 369 SLSRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFTLKKEDDVRRYVVKRLLPAKEGRK 542
++S+ G Q I G+TD PRRLGPKRASKIRKLF L + +DVR+YVV+R + K G+K
Sbjct: 115 TISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVVRRRV-VKSGKK 171
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 87.8 bits (208), Expect = 1e-16
Identities = 45/102 (44%), Positives = 58/102 (56%)
Frame = +2
Query: 26 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGF 205
K+N+S P TG K + D K + + RM +E D LG+E+ G R+ GGND QGF
Sbjct: 8 KVNISNPVTGANKSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGF 67
Query: 206 PMKQGVLTNSRVRLLMSKATLLATDHVVTVRGKRKSVRGCIV 331
PM QGVL + R RLL+ + H KRKS+RGCIV
Sbjct: 68 PMYQGVLKSQRARLLLRQGAKCYL-HRRNGERKRKSIRGCIV 108
Score = 44.8 bits (101), Expect = 0.001
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +3
Query: 384 GAQEIPGLTDGEVPRRLGPKRASKIRKLFTL 476
G + +PGLTD VP+RL PKRASKIR+LF L
Sbjct: 123 GDKTLPGLTDVVVPKRLVPKRASKIRRLFGL 153
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 79.4 bits (187), Expect = 5e-14
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +2
Query: 23 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWK 160
MKLN+S+PATGCQKL EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 72.5 bits (170), Expect = 6e-12
Identities = 38/89 (42%), Positives = 58/89 (65%)
Frame = +2
Query: 65 LFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVR 244
+FE+ +++R+ Y+K++G + D +LG+E++G ++ + GG+D QGFPM G LT RVR
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVR 59
Query: 245 LLMSKATLLATDHVVTVRGKRKSVRGCIV 331
L+SK VR +RKSVRG IV
Sbjct: 60 PLLSKGDAGYRCRRKGVR-RRKSVRGSIV 87
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 56.8 bits (131), Expect = 3e-07
Identities = 26/39 (66%), Positives = 30/39 (76%)
Frame = +3
Query: 378 RKGAQEIPGLTDGEVPRRLGPKRASKIRKLFTLKKEDDV 494
+KGA EI GLTD VPRRLGPKR +K+R+LF KK D V
Sbjct: 120 KKGANEIAGLTDQNVPRRLGPKRLTKLRRLFGFKKADRV 158
Score = 34.7 bits (76), Expect = 1.4
Identities = 25/53 (47%), Positives = 27/53 (50%)
Frame = +2
Query: 173 RVAGGNDKQGFPMKQGVLTNSRVRLLMSKATLLATDHVVTVRGKRKSVRGCIV 331
R GGNDKQG VL RVR+LM K KRKS+RGCIV
Sbjct: 62 RFTGGNDKQG------VLFKGRVRILMRKGHKGYRPR-KDGEMKRKSIRGCIV 107
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 51.2 bits (117), Expect = 2e-05
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Frame = +2
Query: 23 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 202
MK+N++ P G Q + DE I K +G ++ +LG+++ + GG+DKQG
Sbjct: 1 MKINIADPILGTQYSIKRDDEFIEHIIGRK-IGDTIEGSILGEDFSRNEFLINGGHDKQG 59
Query: 203 FPMKQGVLTNSRVRLLMSKATLLATDHVVTVR-GKRKSVRGCIVDA 337
F +K+ + T R+++ + K +L H K+++VRG I+ +
Sbjct: 60 FLLKKNLNTFERLKINVKKGSLGNRSHFKRKNLTKKRTVRGGILSS 105
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 45.6 bits (103), Expect = 8e-04
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +2
Query: 113 RMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKATLLATDHVVT 292
++G E + +LG KGY LR+ GG+DK GFPMK+ V R + L++ T T
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKEDVDGTRRFKSLVNG----GTGFKPT 83
Query: 293 VRG--KRKSVRG 322
+G +RK+VRG
Sbjct: 84 KKGLRRRKTVRG 95
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 44.8 bits (101), Expect = 0.001
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = -2
Query: 331 NNATTNRLAFSSHRHDVVCSKKS-GL*HQETYTAVSQDSLFHREALLVVTAGNTENITFP 155
++ATT RLA + V ++ + L H++ +T V Q +L H EALLVVT + E+++ P
Sbjct: 150 DDATTARLASAFTLASAVAAEAARALGHEQEHTLVRQHALLHAEALLVVTTHDLEDVSLP 209
Query: 154 FV 149
F+
Sbjct: 210 FL 211
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 44.8 bits (101), Expect = 0.001
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Frame = +2
Query: 14 IAVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDA--------DLLGDEWKGYV 169
+A KL +S P +G K E+ ++ KR+G ++ A +L G E+ V
Sbjct: 1 MATFKLVISDPKSGIAKQVEITGAETEKLI-GKRIGDQIPAKELNINLNELFGKEFPEDV 59
Query: 170 -LRVAGGNDKQGFPMKQGVLTNSRVRLLMSK 259
L + GG DK GFPM+ + RVR+L+SK
Sbjct: 60 KLEIRGGTDKDGFPMRPDIHGPRRVRVLLSK 90
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 44.4 bits (100), Expect = 0.002
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Frame = +2
Query: 62 KLFEV-VDEHKLRIFYEKRMGAEVDADLLGDEW-KGYVLRVAGGNDKQGFPMKQGVLTNS 235
K F++ ++ R F KR+G V A +LG E KG L + GG+D+ GFPM+ +
Sbjct: 133 KAFQITIEGENARKFIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRPDIPGPV 192
Query: 236 RVRLLMS 256
+ R L+S
Sbjct: 193 KKRALLS 199
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 41.5 bits (93), Expect = 0.012
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Frame = +2
Query: 14 IAVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDA--------DLLGDEWKGYV 169
+A KL +S P G K E+ ++ +R+G E+ A ++ G+E
Sbjct: 1 MATFKLVISNPKNGVAKQVEISGPEADKLI-GRRIGEEIPASELGLNLSEIFGEEIPADA 59
Query: 170 -LRVAGGNDKQGFPMKQGVLTNSRVRLLMSK 259
L++ GG DK GFPM+ V RV++L+S+
Sbjct: 60 KLKITGGTDKDGFPMRPDVHGPRRVKILLSR 90
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 41.5 bits (93), Expect = 0.012
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Frame = +2
Query: 14 IAVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGND 193
+A ++ V+ P +G FEV D F + +GA VD +G + GY + + GG+D
Sbjct: 1 MATFQVAVADPESGRTYQFEV-DGQDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSD 57
Query: 194 KQGFPMKQGVLTNSRVRLLMSKATLLATDH-----VVTVRGKRKS 313
G PM++ V + + +L+ D VTVRGK S
Sbjct: 58 DAGRPMREDVDGSDLMEVLLEGGAGFNPDEDGERKRVTVRGKEVS 102
>UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S6e -
Nanoarchaeum equitans
Length = 126
Score = 39.9 bits (89), Expect = 0.038
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +2
Query: 17 AVMKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDK 196
+V+K+ VS P +G E + L Y K++G +D +G + GY L++ GG+D
Sbjct: 5 SVVKIVVSDPKSGKAIQIETKEPQWL---YGKKIGDTIDGSKIGLD--GYELKITGGSDI 59
Query: 197 QGFPMKQGV 223
GFPM++ V
Sbjct: 60 AGFPMRKEV 68
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 39.1 bits (87), Expect = 0.066
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Frame = +2
Query: 35 VSYPATG--CQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFP 208
+S P TG QK+ E + ++L K++G + ++ D Y L++ GG D+ GFP
Sbjct: 7 ISDPKTGRAYQKVVEGANANRL---IGKQIGDVISGTIV-DLPPDYELKITGGTDRDGFP 62
Query: 209 MKQGVLTNSRVRLLMSKATLLATDHVVTVRGKRKSVRGCIV 331
M+ + +R RLL+S +R KRK VRG ++
Sbjct: 63 MRPDLPGTARRRLLLSGGVGFRPKE-KGLR-KRKGVRGRVI 101
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 37.9 bits (84), Expect = 0.15
Identities = 22/73 (30%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +2
Query: 110 KRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKATLLATDHVV 289
K++G E+ ++ E +GY L++ GG+D+ GF M+ + ++R+L+ + + V
Sbjct: 28 KKIGDEISGSIV--ELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLKE----GPGYNV 81
Query: 290 TVRG--KRKSVRG 322
+G +RKS+RG
Sbjct: 82 KEKGLRRRKSLRG 94
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 37.5 bits (83), Expect = 0.20
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +2
Query: 116 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSK 259
+G+E DA LG E K +R+ GG+DK G PM+ V +R +L+S+
Sbjct: 39 IGSEADATALGLEGK---IRITGGSDKSGVPMRPDVHGPARKYVLLSR 83
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 36.7 bits (81), Expect = 0.35
Identities = 29/77 (37%), Positives = 39/77 (50%)
Frame = +2
Query: 26 KLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGF 205
KLN+S+ Q L EV + KLR FYEK M E+ + +E N + F
Sbjct: 2 KLNISFLLIVYQILTEVDGKCKLRAFYEKCMTTEITVNFSCEE-----------NADKIF 50
Query: 206 PMKQGVLTNSRVRLLMS 256
MKQ VL + RV LL++
Sbjct: 51 SMKQEVLIHFRVHLLLN 67
>UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S6e -
Methanoregula boonei (strain 6A8)
Length = 143
Score = 36.7 bits (81), Expect = 0.35
Identities = 23/70 (32%), Positives = 39/70 (55%)
Frame = +2
Query: 110 KRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKATLLATDHVV 289
K++G EVDA LG GY + + GG+D+ G P ++ + R +LL+++ + V+
Sbjct: 32 KKIGDEVDAGPLG--LAGYKILITGGSDQTGTPARKSLPGAGRRKLLLAEG--VGFHPVM 87
Query: 290 TVRGKRKSVR 319
KRK +R
Sbjct: 88 EGERKRKMIR 97
>UniRef50_Q5DFQ5 Cluster: SJCHGC04650 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04650 protein - Schistosoma
japonicum (Blood fluke)
Length = 219
Score = 36.3 bits (80), Expect = 0.46
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -1
Query: 185 RRQHGEHNLSIRRLEDLHQLQRPYAFHRRYGACAHPPLQITSDIPL 48
R++ GE ++ + LEDLH+L + RR+G P L + PL
Sbjct: 154 RKRPGEEDILLNYLEDLHKLHEAWLIERRFGPLPAPVLVFDCNAPL 199
>UniRef50_Q7VKW9 Cluster: Possible uroporphyrinogen III synthase;
n=1; Haemophilus ducreyi|Rep: Possible uroporphyrinogen
III synthase - Haemophilus ducreyi
Length = 251
Score = 35.1 bits (77), Expect = 1.1
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 23 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLL 145
M + ++YPA+ QKL ++ +H++ Y+ E+ ADLL
Sbjct: 1 MNVLITYPASRAQKLVDMCQQHRIFAIYQPIFSVELGADLL 41
>UniRef50_Q8SWQ3 Cluster: Putative uncharacterized protein
ECU01_0280; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU01_0280 - Encephalitozoon
cuniculi
Length = 440
Score = 35.1 bits (77), Expect = 1.1
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -2
Query: 337 SINNATTNRLAFSSHRHDVVCSKKSGL*HQETYTAVSQDSLFHREALLVVTAGNTEN 167
SIN+ N + FS + D+ C+K+ AV + + L+ +T+GNTEN
Sbjct: 187 SINDVRVNPIDFSQEKDDLKCAKEDST--LSNVNAVPGEKKGSKNCLIEITSGNTEN 241
>UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S6e
- Candidatus Nitrosopumilus maritimus SCM1
Length = 137
Score = 35.1 bits (77), Expect = 1.1
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 116 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSK 259
+G E DA ++G K L++ GG+DK G PM+ + +R +L+SK
Sbjct: 33 LGQETDASVVGLNGK---LKLTGGSDKSGVPMRNDIHGAARKYVLLSK 77
>UniRef50_A4BZ73 Cluster: Putative uncharacterized protein; n=1;
Polaribacter irgensii 23-P|Rep: Putative uncharacterized
protein - Polaribacter irgensii 23-P
Length = 818
Score = 33.1 bits (72), Expect = 4.3
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = +2
Query: 11 LIAVMKLNV-SYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLR---V 178
L+ KLN+ +Y A+ F V E IFY++ A +D +L+ YVLR V
Sbjct: 711 LLTDYKLNLLTYVASVATTQFAVFSE----IFYKEGWNAYLDGELVPHYRVNYVLRGMQV 766
Query: 179 AGGNDKQGFPMKQGVLTNSRVRLLMSKATLL 271
GN F + V+ RV L+S A LL
Sbjct: 767 PTGNHTIHFKFEPAVIEQGRVFSLISYALLL 797
>UniRef50_O86476 Cluster: Clumping factor B precursor; n=31;
Staphylococcus aureus|Rep: Clumping factor B precursor -
Staphylococcus aureus
Length = 913
Score = 32.7 bits (71), Expect = 5.7
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 26 KLNVSYPAT-GCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 202
KL+ SY A L EV D+ K RI+YE A + GD K YV+ V G D G
Sbjct: 441 KLSDSYYADPNDSNLKEVTDQFKNRIYYEHPNVASIK---FGDITKTYVVLVEGHYDNTG 497
Query: 203 FPMKQGVL 226
+K V+
Sbjct: 498 KNLKTQVI 505
>UniRef50_Q981I1 Cluster: Transposase; n=4; Rhizobiales|Rep:
Transposase - Rhizobium loti (Mesorhizobium loti)
Length = 550
Score = 32.3 bits (70), Expect = 7.5
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 366 WSLSRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFTLKKEDDVRRYVVKR 515
WS +R+ A+E+ + DG PRR RA+ +L T + + + RY + R
Sbjct: 21 WSAARRLARELDRVLDGSGPRRAAINRAAAELRLSTRQVYNLLARYRIDR 70
>UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S6e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 217
Score = 32.3 bits (70), Expect = 7.5
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +2
Query: 113 RMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMS 256
++G D L+G GY L + GG+D GFPM + + R+L+S
Sbjct: 132 KIGDTFDGGLVG--LPGYKLLIRGGSDNSGFPMLPSIPGPVKKRVLLS 177
>UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5;
Thermoplasmatales|Rep: 30S ribosomal protein S6e -
Thermoplasma volcanium
Length = 128
Score = 32.3 bits (70), Expect = 7.5
Identities = 23/102 (22%), Positives = 49/102 (48%)
Frame = +2
Query: 35 VSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMK 214
++ P TG E+ E ++ +++G EVD + GY +++ GG+ GF M+
Sbjct: 8 IADPKTGKTYKREIPSE-RMSSLIGRKIGEEVDGVFF--DLVGYKMKITGGSSVDGFAMR 64
Query: 215 QGVLTNSRVRLLMSKATLLATDHVVTVRGKRKSVRGCIVDAN 340
+ T + ++L+ + + + KR + RG I+ ++
Sbjct: 65 PDLQTQGKKQILVKYTSGYRGKNGIR---KRITARGSIIGSD 103
>UniRef50_Q8YQA8 Cluster: Alr3925 protein; n=5; Nostocaceae|Rep:
Alr3925 protein - Anabaena sp. (strain PCC 7120)
Length = 987
Score = 31.9 bits (69), Expect = 9.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1
Query: 188 YRRQHGEHNLSIRRLEDLHQLQRPYAFHRRYGACAHPPLQITSD 57
Y G+H+L+ E+ HQ+Q+ Y H+RYG P L++ D
Sbjct: 758 YEHLSGKHSLTD---EERHQIQK-YNLHQRYGILVTPSLKLRDD 797
>UniRef50_Q08TN9 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 754
Score = 31.9 bits (69), Expect = 9.9
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 336 LTFQSP*APLWSLSRKGAQEIPGLTDGEVPR-RLGPKRASKIRKLFTLKKEDDVRRYVVK 512
L + P APL ++ R+GA +P GE R R+G R + +++ D VR V+
Sbjct: 301 LPIRVPDAPLRAVLRRGAIRLPARDTGEPTRARVGRGARRAHRAILRIERADAVRVIHVE 360
Query: 513 RLLPAKEG 536
R A G
Sbjct: 361 RAAVAAHG 368
>UniRef50_A5N0X0 Cluster: Putative uncharacterized protein; n=1;
Clostridium kluyveri DSM 555|Rep: Putative
uncharacterized protein - Clostridium kluyveri DSM 555
Length = 860
Score = 31.9 bits (69), Expect = 9.9
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 62 KLFEVVDEHKLRIFYEKRMGAEVDADLLGDE-WKGY 166
KL E ++HK IF +R+ E + LLGDE WK Y
Sbjct: 747 KLIEDDNQHKYTIFLSRRIEDEKNNVLLGDEIWKEY 782
>UniRef50_A1SN07 Cluster: ATP-dependent helicase HrpA; n=4;
Actinomycetales|Rep: ATP-dependent helicase HrpA -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 1282
Score = 31.9 bits (69), Expect = 9.9
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 74 VVDEHKLRIFYEKRMGAEVDADLLGDEW 157
VVDEH L FY+ R+GA+V + D+W
Sbjct: 774 VVDEHTLFDFYDARVGADVVSGAHFDQW 801
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,995,485
Number of Sequences: 1657284
Number of extensions: 10485354
Number of successful extensions: 24591
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 23988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24565
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35405708495
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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