Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_C22
(545 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132902-1|CAB81996.1| 246|Caenorhabditis elegans Hypothetical ... 147 4e-36
Z74032-4|CAA98463.2| 404|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z77133-7|CAB00865.2| 735|Caenorhabditis elegans Hypothetical pr... 27 8.8
U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 27 8.8
U40483-1|AAA99775.1| 322|Caenorhabditis elegans NEX1 annexin pr... 27 8.8
U00064-7|AAB52702.1| 322|Caenorhabditis elegans Annexin family ... 27 8.8
AL008868-4|CAO82021.1| 735|Caenorhabditis elegans Hypothetical ... 27 8.8
AF067942-9|AAG45572.1| 347|Caenorhabditis elegans Hypothetical ... 27 8.8
AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 27 8.8
>AL132902-1|CAB81996.1| 246|Caenorhabditis elegans Hypothetical
protein Y71A12B.1 protein.
Length = 246
Score = 147 bits (357), Expect = 4e-36
Identities = 71/106 (66%), Positives = 81/106 (76%)
Frame = +2
Query: 23 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 202
M+LN +YPATG QK FEV +E KLR+F+EKRM EV D LGDEWKGYV+R+ GGNDKQG
Sbjct: 1 MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQG 60
Query: 203 FPMKQGVLTNSRVRLLMSKATLLATDHVVTVRGKRKSVRGCIVDAN 340
FPMKQG+LTN RVRLL+ K + R KRKSVRGCIVDAN
Sbjct: 61 FPMKQGILTNGRVRLLLKKGQSCYRERKNGER-KRKSVRGCIVDAN 105
Score = 66.1 bits (154), Expect = 2e-11
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +3
Query: 378 RKGAQEIPGLTDGEVPRRLGPKRASKIRKLFTLKKEDDVRRYVV 509
+KG EI GLTD +PR+LGPKRASKIRKLF L K DDV +YV+
Sbjct: 115 KKGDGEIEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVI 158
>Z74032-4|CAA98463.2| 404|Caenorhabditis elegans Hypothetical
protein F35B12.5 protein.
Length = 404
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/42 (42%), Positives = 20/42 (47%)
Frame = +1
Query: 181 RR*RQAGLPYETGSPD*QPCTSLDVKGHSSCYRPRRDGERKT 306
RR +A Y T PD QPC SL KG S Y P + T
Sbjct: 311 RRDNRAPDSYRTYEPD-QPCHSLYQKGQSISYYPSEAAGKTT 351
>Z77133-7|CAB00865.2| 735|Caenorhabditis elegans Hypothetical
protein K03A11.1 protein.
Length = 735
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 164 NLSIRRLEDLHQLQRPYAFHRRY 96
N+ +RRLE+L ++RP H R+
Sbjct: 227 NMVVRRLEELGAIERPLNLHVRF 249
>U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated
protein 27 protein.
Length = 242
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 432 LGPKRASKIRKLFTLKKEDDVRRYVVKRLLPAKEGRK 542
L P+R K+RKL +K +D++R ++LL +E +K
Sbjct: 41 LTPERKKKLRKLLMVKAAEDLKR---QQLLKEQERQK 74
>U40483-1|AAA99775.1| 322|Caenorhabditis elegans NEX1 annexin
protein.
Length = 322
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = +2
Query: 92 LRIFYEKRMGAEVDADLLGD---EWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLM-SK 259
+R+ YEK G ++AD+ GD E++ ++ + G+ + VRL K
Sbjct: 122 IRVTYEKEYGKALEADIAGDTSGEFRDLLVSLVTGSKDGSHDTNDAQAKDDAVRLFADGK 181
Query: 260 ATLLATD 280
A L D
Sbjct: 182 AKLAKKD 188
>U00064-7|AAB52702.1| 322|Caenorhabditis elegans Annexin family
protein 1 protein.
Length = 322
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = +2
Query: 92 LRIFYEKRMGAEVDADLLGD---EWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLM-SK 259
+R+ YEK G ++AD+ GD E++ ++ + G+ + VRL K
Sbjct: 122 IRVTYEKEYGKALEADIAGDTSGEFRDLLVSLVTGSKDGSHDTNDAQAKDDAVRLFADGK 181
Query: 260 ATLLATD 280
A L D
Sbjct: 182 AKLAKKD 188
>AL008868-4|CAO82021.1| 735|Caenorhabditis elegans Hypothetical
protein K03A11.1 protein.
Length = 735
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 164 NLSIRRLEDLHQLQRPYAFHRRY 96
N+ +RRLE+L ++RP H R+
Sbjct: 227 NMVVRRLEELGAIERPLNLHVRF 249
>AF067942-9|AAG45572.1| 347|Caenorhabditis elegans Hypothetical
protein ZK6.2 protein.
Length = 347
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 240 TRLLVRTPCFIGKPCLSLPPATRR 169
TR + CF+G+ C PP TR+
Sbjct: 37 TRTMPIKKCFLGENCFERPPFTRK 60
>AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2
protein.
Length = 242
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 432 LGPKRASKIRKLFTLKKEDDVRRYVVKRLLPAKEGRK 542
L P+R K+RKL +K +D++R ++LL +E +K
Sbjct: 41 LTPERKKKLRKLLMVKAAEDLKR---QQLLKEQERQK 74
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,293,662
Number of Sequences: 27780
Number of extensions: 253289
Number of successful extensions: 566
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 564
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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