Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_C21
         (127 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   1.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    19   4.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    19   4.6  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       19   6.1  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 1.1
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 59  PWLPQTEFTWWTIVVF 106
           PW  +   TW++I VF
Sbjct: 197 PWGKRAYVTWYSISVF 212


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +2

Query: 56   WPWLPQTEFTWW 91
            WP+ P+  FT++
Sbjct: 1254 WPFDPKVNFTYF 1265


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +2

Query: 56   WPWLPQTEFTWW 91
            WP+ P+  FT++
Sbjct: 1254 WPFDPKVNFTYF 1265


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -2

Query: 78 SVCGSHG 58
          S+CG HG
Sbjct: 36 SICGEHG 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,401
Number of Sequences: 336
Number of extensions: 396
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 22
effective length of database: 115,193
effective search space used:  2188667
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)