Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_C21
         (127 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_4940| Best HMM Match : DUF755 (HMM E-Value=2.3)                     27   3.1  
SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   3.1  
SB_42291| Best HMM Match : Tyrosinase (HMM E-Value=0.0014)             26   5.4  
SB_23835| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   7.2  

>SB_4940| Best HMM Match : DUF755 (HMM E-Value=2.3)
          Length = 173

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 117 AVRWNTTIVHHVNSVCGSHGQY 52
           A RW T   H+   +CG HG+Y
Sbjct: 55  ATRWTTN--HNCYHICGHHGRY 74


>SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 848

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 127 GHYCRPMEHHYCPPRELCLR 68
           GH C+P     CPP   C+R
Sbjct: 805 GHQCQPDTCDSCPPNSHCMR 824


>SB_42291| Best HMM Match : Tyrosinase (HMM E-Value=0.0014)
          Length = 406

 Score = 25.8 bits (54), Expect = 5.4
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 29  LSCFSSSPYWPWLPQTEFTWWTI 97
           + C  + PYW W  Q    W T+
Sbjct: 216 IDCRVTIPYWQWTAQAGHLWRTL 238


>SB_23835| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 596

 Score = 25.4 bits (53), Expect = 7.2
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -2

Query: 126 VTIAVRWNTTIVHHVNSVCGSHGQYGEEE 40
           VT+AV+ + T   +V + C  HG  G +E
Sbjct: 253 VTVAVKRSATCATNVQNRCTLHGDRGGQE 281


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,127,895
Number of Sequences: 59808
Number of extensions: 50443
Number of successful extensions: 164
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 16,821,457
effective HSP length: 22
effective length of database: 15,505,681
effective search space used: 294607939
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)