Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_C18
         (543 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    46   2e-05
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    42   2e-04
U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like pr...    41   7e-04
AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like ...    37   0.008
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    35   0.044
AF022971-2|AAG23980.1|  327|Caenorhabditis elegans Seven tm rece...    32   0.23 
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    32   0.31 
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    31   0.41 
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    30   1.2  
L14745-8|AAA27923.1|  244|Caenorhabditis elegans Tetraspanin fam...    28   3.8  
Z83108-2|CAB05510.1|  820|Caenorhabditis elegans Hypothetical pr...    27   6.6  
Z54235-2|CAA90972.2|  371|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 45.6 bits (103), Expect = 2e-05
 Identities = 26/77 (33%), Positives = 42/77 (54%)
 Frame = +2

Query: 308 TVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCVTGAILIEG 487
           T+ ++++GG+++    +PW V +      H    CGGSLI   +VLTAAHC   A     
Sbjct: 53  TLDHRLIGGSESSPHSWPWTVQLLSRLGHHR---CGGSLIDPNFVLTAAHCF--AKDRRP 107

Query: 488 TPKNVRLGEYNTTNNGP 538
           T  +VR+G + + +  P
Sbjct: 108 TSYSVRVGGHRSGSGSP 124


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
 Frame = +2

Query: 272 LESNN---ECCGVEDTVVNKIV---GGNDTKITQY-PWLVVIEYESFD-HMKLLCGGSLI 427
           + SNN   E CG + T  + ++    GN    T   PW V I  ++     +++CGG+LI
Sbjct: 8   INSNNLDDELCGRQSTYTSFMLTDAAGNTGNPTHLAPWAVQIRVKARKGDFEVICGGTLI 67

Query: 428 SSKYVLTAAHC 460
           + K+VLTAAHC
Sbjct: 68  TLKHVLTAAHC 78


>U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like
           protease protein 6 protein.
          Length = 360

 Score = 40.7 bits (91), Expect = 7e-04
 Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
 Frame = +2

Query: 248 SRAVTAFPLESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIE-YESFDHMKLL----C 412
           SR +TA   E   E CG    V +KI  G   +I + PW V I  Y +  ++       C
Sbjct: 18  SRKLTAEENEKRLEDCG--KNVKSKIFNGRKAEIDEAPWAVRINTYTNVKNIDETWSKHC 75

Query: 413 GGSLISSKYVLTAAHC 460
            G+L S +++LTA HC
Sbjct: 76  SGTLTSPRHILTATHC 91


>AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like
           protease protein 7 protein.
          Length = 522

 Score = 37.1 bits (82), Expect = 0.008
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +2

Query: 320 KIVGGNDTKITQYPWLVVIEYESFDHMKLL-CGGSLISSKYVLTAAHCVTG 469
           K+  G D   ++ PW V     S D      C G+++S +++L A HC  G
Sbjct: 162 KVYNGRDASQSEAPWSVFTYLYSKDEQSATTCTGTIVSPRHILIATHCFAG 212


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 34.7 bits (76), Expect = 0.044
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = +2

Query: 314 VNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHC 460
           + ++VGG +T    +PW   +  ++       CG S++   +++TAAHC
Sbjct: 24  IARVVGGFETVPGAFPWTAALRNKATKAHH--CGASILDKTHLITAAHC 70


>AF022971-2|AAG23980.1|  327|Caenorhabditis elegans Seven tm
           receptor protein 46 protein.
          Length = 327

 Score = 32.3 bits (70), Expect = 0.23
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
 Frame = +2

Query: 302 EDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMK------LLCGGSLISSKYVL 445
           +D + N  +   D  ITQ    V+I Y S D ++      ++CGGSL++ +YV+
Sbjct: 159 DDYLRNTFLDSYDLDITQTARFVLIPYASDDSLRWRNLSFIICGGSLLTVQYVI 212


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 31.9 bits (69), Expect = 0.31
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = +2

Query: 338 DTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAH 457
           ++KI  +PW V    +  + +    GGS+IS  +++TAAH
Sbjct: 22  ESKIKNFPWAVSFTVDGVNRL----GGSIISPYHIITAAH 57


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 31.5 bits (68), Expect = 0.41
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = +2

Query: 320 KIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTAAHCV----TGAILIEG 487
           +I+GGN        W+  +     +   +LCG ++I   +++TAAHC     T + +   
Sbjct: 37  RIIGGNSID-DGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQTRSFVYVR 95

Query: 488 TPKNVR 505
            PKN R
Sbjct: 96  EPKNNR 101


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = +2

Query: 407 LCGGSLISSKYVLTAAHCV 463
           +CGG LI+   V+T+AHCV
Sbjct: 45  VCGGVLIAPSIVITSAHCV 63


>L14745-8|AAA27923.1|  244|Caenorhabditis elegans Tetraspanin family
           protein 1 protein.
          Length = 244

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 18/70 (25%), Positives = 35/70 (50%)
 Frame = +2

Query: 272 LESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLLCGGSLISSKYVLTA 451
           ++    CCG+E+++ N +  G    ++Q P   V  ++S D+  ++ G  L+    + T 
Sbjct: 152 IQDKYNCCGIENSLFNVMYCG---PMSQKPHCDVAVFDSVDNTMMISGIILLVILILQTI 208

Query: 452 AHCVTGAILI 481
           A  +   ILI
Sbjct: 209 AIILPVPILI 218


>Z83108-2|CAB05510.1|  820|Caenorhabditis elegans Hypothetical
           protein F44E5.2 protein.
          Length = 820

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 16/59 (27%), Positives = 31/59 (52%)
 Frame = +2

Query: 233 LNERCSRAVTAFPLESNNECCGVEDTVVNKIVGGNDTKITQYPWLVVIEYESFDHMKLL 409
           +N+  S+   +FP   N     + DT +  + G ++ K  Q   ++ +E+ES+D +K L
Sbjct: 160 INDEFSQLCNSFP---NLHKLDISDTNIGNLSGISNLKNLQKLCMMNLEFESYDDIKEL 215


>Z54235-2|CAA90972.2|  371|Caenorhabditis elegans Hypothetical
           protein C09G9.2 protein.
          Length = 371

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 254 AVTAFPLESNNECCGVEDTVVNKIVGGN 337
           A+ + P +SN  CCG +D +V  I   N
Sbjct: 225 ALCSHPAQSNLVCCGTDDGIVGLIDARN 252


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,458,046
Number of Sequences: 27780
Number of extensions: 291639
Number of successful extensions: 810
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)