Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_C16
(582 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64847-1|AAN84827.1| 358|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z68215-14|CAL49436.1| 394|Caenorhabditis elegans Hypothetical p... 39 0.003
Z68215-13|CAL49435.1| 382|Caenorhabditis elegans Hypothetical p... 39 0.003
Z68215-12|CAA92455.2| 368|Caenorhabditis elegans Hypothetical p... 39 0.003
Z68215-10|CAC42269.1| 399|Caenorhabditis elegans Hypothetical p... 39 0.003
Z68215-9|CAC42270.1| 384|Caenorhabditis elegans Hypothetical pr... 39 0.003
AM231684-1|CAJ77753.1| 384|Caenorhabditis elegans GDP-mannose 4... 39 0.003
AM231683-1|CAJ77752.1| 399|Caenorhabditis elegans GDP-mannose 4... 39 0.003
Z81553-5|CAB04494.1| 382|Caenorhabditis elegans Hypothetical pr... 37 0.009
AM231685-1|CAJ77754.1| 375|Caenorhabditis elegans GDP-mannose 4... 37 0.009
Z81470-7|CAB03885.1| 129|Caenorhabditis elegans Hypothetical pr... 29 1.8
U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protei... 28 4.2
U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protei... 28 4.2
U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain, un... 28 5.6
U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain, un... 28 5.6
U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein. 28 5.6
L08403-3|AAT92076.1| 335|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z47069-2|CAA87337.1| 313|Caenorhabditis elegans Hypothetical pr... 27 9.7
>U64847-1|AAN84827.1| 358|Caenorhabditis elegans Hypothetical
protein F08F3.4 protein.
Length = 358
Score = 55.6 bits (128), Expect = 2e-08
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Frame = +3
Query: 183 DVTAPGVAEQLVAGA--DVLFHLAAVVSGHAEIDFDLGLRVNFDATRALLEAARRKAPNL 356
D+ G E++V D + H +A++S E + L L+VN +L+ A + L
Sbjct: 88 DILNQGSIEEIVVNKNIDTIVHFSALLSAVGETNVPLALQVNCRGVENILQVAAKH--KL 145
Query: 357 RFVFASTVGVFGGEPPPA-VGELTVTAPHSSYGAAKAMSELLVNDYARRGWADARAVRLP 533
+ ST+G FG P +LTV P + YG +K +E L + R D R++R P
Sbjct: 146 KVFIPSTIGAFGPTTPRENTPDLTVQCPTTIYGVSKVYAERLGEYFNHRFGVDFRSMRFP 205
Query: 534 TV 539
+
Sbjct: 206 GI 207
>Z68215-14|CAL49436.1| 394|Caenorhabditis elegans Hypothetical
protein C53B4.7e protein.
Length = 394
Score = 38.7 bits (86), Expect = 0.003
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Frame = +3
Query: 150 HADSRVSTLAADVTAPGVAEQLVAGADV--LFHLAAVVSGHAEIDFDLG---LRVNFDAT 314
H DS S D+T +L++ + ++HLAA H ++ FDL V+ T
Sbjct: 98 HGDSSFSLHYGDMTDSSCLIKLISTIEPTEVYHLAA--QSHVKVSFDLPEYTAEVDAVGT 155
Query: 315 RALLEA--ARRKAPNLRFVFASTVGVFGGEPPPAVGELTVTAPHSSYGAAKAMSELLVND 488
LL+A A R +RF AST ++G E T P S Y AK +V +
Sbjct: 156 LRLLDAIHACRLTEKVRFYQASTSELYGKVQEIPQSEKTPFYPRSPYAVAKMYGYWIVVN 215
Query: 489 Y 491
Y
Sbjct: 216 Y 216
>Z68215-13|CAL49435.1| 382|Caenorhabditis elegans Hypothetical
protein C53B4.7d protein.
Length = 382
Score = 38.7 bits (86), Expect = 0.003
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Frame = +3
Query: 150 HADSRVSTLAADVTAPGVAEQLVAGADV--LFHLAAVVSGHAEIDFDLG---LRVNFDAT 314
H DS S D+T +L++ + ++HLAA H ++ FDL V+ T
Sbjct: 86 HGDSSFSLHYGDMTDSSCLIKLISTIEPTEVYHLAA--QSHVKVSFDLPEYTAEVDAVGT 143
Query: 315 RALLEA--ARRKAPNLRFVFASTVGVFGGEPPPAVGELTVTAPHSSYGAAKAMSELLVND 488
LL+A A R +RF AST ++G E T P S Y AK +V +
Sbjct: 144 LRLLDAIHACRLTEKVRFYQASTSELYGKVQEIPQSEKTPFYPRSPYAVAKMYGYWIVVN 203
Query: 489 Y 491
Y
Sbjct: 204 Y 204
>Z68215-12|CAA92455.2| 368|Caenorhabditis elegans Hypothetical
protein C53B4.7c protein.
Length = 368
Score = 38.7 bits (86), Expect = 0.003
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Frame = +3
Query: 150 HADSRVSTLAADVTAPGVAEQLVAGADV--LFHLAAVVSGHAEIDFDLG---LRVNFDAT 314
H DS S D+T +L++ + ++HLAA H ++ FDL V+ T
Sbjct: 72 HGDSSFSLHYGDMTDSSCLIKLISTIEPTEVYHLAA--QSHVKVSFDLPEYTAEVDAVGT 129
Query: 315 RALLEA--ARRKAPNLRFVFASTVGVFGGEPPPAVGELTVTAPHSSYGAAKAMSELLVND 488
LL+A A R +RF AST ++G E T P S Y AK +V +
Sbjct: 130 LRLLDAIHACRLTEKVRFYQASTSELYGKVQEIPQSEKTPFYPRSPYAVAKMYGYWIVVN 189
Query: 489 Y 491
Y
Sbjct: 190 Y 190
>Z68215-10|CAC42269.1| 399|Caenorhabditis elegans Hypothetical
protein C53B4.7b protein.
Length = 399
Score = 38.7 bits (86), Expect = 0.003
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Frame = +3
Query: 150 HADSRVSTLAADVTAPGVAEQLVAGADV--LFHLAAVVSGHAEIDFDLG---LRVNFDAT 314
H DS S D+T +L++ + ++HLAA H ++ FDL V+ T
Sbjct: 103 HGDSSFSLHYGDMTDSSCLIKLISTIEPTEVYHLAA--QSHVKVSFDLPEYTAEVDAVGT 160
Query: 315 RALLEA--ARRKAPNLRFVFASTVGVFGGEPPPAVGELTVTAPHSSYGAAKAMSELLVND 488
LL+A A R +RF AST ++G E T P S Y AK +V +
Sbjct: 161 LRLLDAIHACRLTEKVRFYQASTSELYGKVQEIPQSEKTPFYPRSPYAVAKMYGYWIVVN 220
Query: 489 Y 491
Y
Sbjct: 221 Y 221
>Z68215-9|CAC42270.1| 384|Caenorhabditis elegans Hypothetical
protein C53B4.7a protein.
Length = 384
Score = 38.7 bits (86), Expect = 0.003
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Frame = +3
Query: 150 HADSRVSTLAADVTAPGVAEQLVAGADV--LFHLAAVVSGHAEIDFDLG---LRVNFDAT 314
H DS S D+T +L++ + ++HLAA H ++ FDL V+ T
Sbjct: 88 HGDSSFSLHYGDMTDSSCLIKLISTIEPTEVYHLAA--QSHVKVSFDLPEYTAEVDAVGT 145
Query: 315 RALLEA--ARRKAPNLRFVFASTVGVFGGEPPPAVGELTVTAPHSSYGAAKAMSELLVND 488
LL+A A R +RF AST ++G E T P S Y AK +V +
Sbjct: 146 LRLLDAIHACRLTEKVRFYQASTSELYGKVQEIPQSEKTPFYPRSPYAVAKMYGYWIVVN 205
Query: 489 Y 491
Y
Sbjct: 206 Y 206
>AM231684-1|CAJ77753.1| 384|Caenorhabditis elegans GDP-mannose
4,6-dehydratase protein.
Length = 384
Score = 38.7 bits (86), Expect = 0.003
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Frame = +3
Query: 150 HADSRVSTLAADVTAPGVAEQLVAGADV--LFHLAAVVSGHAEIDFDLG---LRVNFDAT 314
H DS S D+T +L++ + ++HLAA H ++ FDL V+ T
Sbjct: 88 HGDSSFSLHYGDMTDSSCLIKLISTIEPTEVYHLAA--QSHVKVSFDLPEYTAEVDAVGT 145
Query: 315 RALLEA--ARRKAPNLRFVFASTVGVFGGEPPPAVGELTVTAPHSSYGAAKAMSELLVND 488
LL+A A R +RF AST ++G E T P S Y AK +V +
Sbjct: 146 LRLLDAIHACRLTEKVRFYQASTSELYGKVQEIPQSEKTPFYPRSPYAVAKMYGYWIVVN 205
Query: 489 Y 491
Y
Sbjct: 206 Y 206
>AM231683-1|CAJ77752.1| 399|Caenorhabditis elegans GDP-mannose
4,6-dehydratase protein.
Length = 399
Score = 38.7 bits (86), Expect = 0.003
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Frame = +3
Query: 150 HADSRVSTLAADVTAPGVAEQLVAGADV--LFHLAAVVSGHAEIDFDLG---LRVNFDAT 314
H DS S D+T +L++ + ++HLAA H ++ FDL V+ T
Sbjct: 103 HGDSSFSLHYGDMTDSSCLIKLISTIEPTEVYHLAA--QSHVKVSFDLPEYTAEVDAVGT 160
Query: 315 RALLEA--ARRKAPNLRFVFASTVGVFGGEPPPAVGELTVTAPHSSYGAAKAMSELLVND 488
LL+A A R +RF AST ++G E T P S Y AK +V +
Sbjct: 161 LRLLDAIHACRLTEKVRFYQASTSELYGKVQEIPQSEKTPFYPRSPYAVAKMYGYWIVVN 220
Query: 489 Y 491
Y
Sbjct: 221 Y 221
>Z81553-5|CAB04494.1| 382|Caenorhabditis elegans Hypothetical
protein F56H6.5 protein.
Length = 382
Score = 37.1 bits (82), Expect = 0.009
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +3
Query: 234 LFHLAAVVSGHAEIDFDLG---LRVNFDATRALLEA--ARRKAPNLRFVFASTVGVFGGE 398
++HLAA H ++ FDL V+ T LL+A A R +RF AST ++G
Sbjct: 116 IYHLAA--QSHVKVSFDLPEYTAEVDAVGTLRLLDAIHACRLTEKVRFYQASTSELYGKV 173
Query: 399 PPPAVGELTVTAPHSSYGAAKAMSELLVNDY 491
ELT P S Y AK +V +Y
Sbjct: 174 QEIPQSELTPFYPRSPYAVAKMYGYWIVVNY 204
>AM231685-1|CAJ77754.1| 375|Caenorhabditis elegans GDP-mannose
4,6-dehydratase protein.
Length = 375
Score = 37.1 bits (82), Expect = 0.009
Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +3
Query: 234 LFHLAAVVSGHAEIDFDLG---LRVNFDATRALLEA--ARRKAPNLRFVFASTVGVFGGE 398
++HLAA H ++ FDL V+ T LL+A A R +RF AST ++G
Sbjct: 109 IYHLAA--QSHVKVSFDLPEYTAEVDAVGTLRLLDAIHACRLTEKVRFYQASTSELYGKV 166
Query: 399 PPPAVGELTVTAPHSSYGAAKAMSELLVNDY 491
ELT P S Y AK +V +Y
Sbjct: 167 QEIPQSELTPFYPRSPYAVAKMYGYWIVVNY 197
>Z81470-7|CAB03885.1| 129|Caenorhabditis elegans Hypothetical
protein C14A6.8 protein.
Length = 129
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +3
Query: 303 FDATRALLEAARRKAPNLRFVFASTVGVFGGEPPPAVGELTV 428
FD T LL++ + NL + + V G EPPP LTV
Sbjct: 6 FDPTNNLLKSDGNEYQNLAILDPNAPAVGGNEPPPPPPPLTV 47
>U00066-9|AAA50743.3| 780|Caenorhabditis elegans Mediator protein
15, isoform a protein.
Length = 780
Score = 28.3 bits (60), Expect = 4.2
Identities = 32/121 (26%), Positives = 45/121 (37%), Gaps = 6/121 (4%)
Frame = +3
Query: 126 QPTLSPKRHADSRVSTLAADVT--APGVAEQLVA-GADVLFHLAAVVSGHAEIDFDLGLR 296
QPT + R+ V+T A T AP L A A +AA V+ D +
Sbjct: 116 QPTSAQARNPPVTVATTQASTTPSAPNPPGGLPAPSASATAAVAAAVASFPSPDTSIRPG 175
Query: 297 VNFDATRALLEAARRKAPNLRFVFASTV---GVFGGEPPPAVGELTVTAPHSSYGAAKAM 467
APN+ F S+ G G+PPP +G + P + YG M
Sbjct: 176 GQITPGSQAPGGGPTPAPNVPFPNGSSQMNGGPAMGQPPPQMGAPNMGGPPNGYGGYGMM 235
Query: 468 S 470
+
Sbjct: 236 N 236
>U00066-8|AAM54164.1| 777|Caenorhabditis elegans Mediator protein
15, isoform b protein.
Length = 777
Score = 28.3 bits (60), Expect = 4.2
Identities = 32/121 (26%), Positives = 45/121 (37%), Gaps = 6/121 (4%)
Frame = +3
Query: 126 QPTLSPKRHADSRVSTLAADVT--APGVAEQLVA-GADVLFHLAAVVSGHAEIDFDLGLR 296
QPT + R+ V+T A T AP L A A +AA V+ D +
Sbjct: 113 QPTSAQARNPPVTVATTQASTTPSAPNPPGGLPAPSASATAAVAAAVASFPSPDTSIRPG 172
Query: 297 VNFDATRALLEAARRKAPNLRFVFASTV---GVFGGEPPPAVGELTVTAPHSSYGAAKAM 467
APN+ F S+ G G+PPP +G + P + YG M
Sbjct: 173 GQITPGSQAPGGGPTPAPNVPFPNGSSQMNGGPAMGQPPPQMGAPNMGGPPNGYGGYGMM 232
Query: 468 S 470
+
Sbjct: 233 N 233
>U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform a protein.
Length = 1837
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 24 CDRRRRILGARLADYLLE 77
C+R RRI+GA + YLLE
Sbjct: 274 CERGRRIVGAEMKTYLLE 291
>U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform b protein.
Length = 1839
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 24 CDRRRRILGARLADYLLE 77
C+R RRI+GA + YLLE
Sbjct: 274 CERGRRIVGAEMKTYLLE 291
>U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein.
Length = 1839
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 24 CDRRRRILGARLADYLLE 77
C+R RRI+GA + YLLE
Sbjct: 274 CERGRRIVGAEMKTYLLE 291
>L08403-3|AAT92076.1| 335|Caenorhabditis elegans Hypothetical
protein F42H10.3 protein.
Length = 335
Score = 27.9 bits (59), Expect = 5.6
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 387 FGGEPPPAVGELTVTAPHSSYGAAKA 464
F G PPP+ ++ T+PHS+ + ++
Sbjct: 234 FAGAPPPSSNSISSTSPHSTLSSPQS 259
>Z47069-2|CAA87337.1| 313|Caenorhabditis elegans Hypothetical
protein F36G3.2 protein.
Length = 313
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +3
Query: 150 HADSRVSTLAADVTAPGVAEQLVAGADVLFHLAAVVSG 263
+ADS ++A GV +L ADVLFHL V SG
Sbjct: 229 YADSPSIAMSALRVFSGVMFELHPEADVLFHLLDVGSG 266
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,454,799
Number of Sequences: 27780
Number of extensions: 176445
Number of successful extensions: 589
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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