Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_C16
         (582 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      25   0.54 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   8.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   8.9  

>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = -2

Query: 440 MWCSHSELADGRRGFAAENTDRAREYKPQVRRLTSGCLEQRPRRVEVNAQPE 285
           M+ S  E    R+   + +   + EYKP++        EQR ++VE++   E
Sbjct: 147 MYSSGGEEITPRQSHQSYHHMDSVEYKPEIMEYKPDVEEQRYKQVEISQMTE 198


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/30 (26%), Positives = 13/30 (43%)
 Frame = -2

Query: 581 ERRHCQVGRAAAHAHCGQAHSASVCPASTR 492
           E++ C         H   +HS   CPA ++
Sbjct: 258 EKQECTECPIGKFKHEAGSHSCEACPAHSK 287


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -2

Query: 344  LTSGCLEQRPRRVEVNAQPEIKVDLCVTAHN 252
            L S  ++ + R V  N QP     L V  HN
Sbjct: 1546 LVSNSVKMQRRFVVTNLQPSSVYQLKVETHN 1576


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -2

Query: 344  LTSGCLEQRPRRVEVNAQPEIKVDLCVTAHN 252
            L S  ++ + R V  N QP     L V  HN
Sbjct: 1542 LVSNSVKMQRRFVVTNLQPSSVYQLKVETHN 1572


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,785
Number of Sequences: 438
Number of extensions: 2025
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)