Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_C15
         (428 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF211930-1|AAF37619.1|  108|Homo sapiens immunoglobulin heavy ch...    30   3.8  
D78130-1|BAA22372.1|  574|Homo sapiens squalene epoxidase protein.     29   5.1  
BC017033-1|AAH17033.1|  574|Homo sapiens squalene epoxidase prot...    29   5.1  
AY062319-1|AAL65747.1|  111|Homo sapiens immunoglobulin heavy ch...    29   5.1  
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai...    29   5.1  
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai...    29   5.1  
AF098865-1|AAD10823.1|  574|Homo sapiens squalene epoxidase prot...    29   5.1  
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.                29   5.1  

>AF211930-1|AAF37619.1|  108|Homo sapiens immunoglobulin heavy chain
           variable region 194-4 protein.
          Length = 108

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
 Frame = -3

Query: 198 LGSSSCAASRYTCTTEAKHW---ANDRRQ*AAGTINHSTPDHVYSKCSKETHRALSATS 31
           L   SC AS YT T+ A HW   A  +R    G IN    D  YS+  ++     S TS
Sbjct: 1   LSEVSCKASGYTFTSYAMHWVRQAPGQRLEWMGWINAGNGDTKYSQKFQDRVTITSDTS 59


>D78130-1|BAA22372.1|  574|Homo sapiens squalene epoxidase protein.
          Length = 574

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -3

Query: 315 CVLQFQSLIFELALRCRSQHGGRCQLGNDAAGNDVAV 205
           CVL F SL   L+ RCR ++GG   LG   +G+  A+
Sbjct: 31  CVLVFLSLGLVLSYRCRHRNGG--LLGRQRSGSQFAL 65


>BC017033-1|AAH17033.1|  574|Homo sapiens squalene epoxidase
           protein.
          Length = 574

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -3

Query: 315 CVLQFQSLIFELALRCRSQHGGRCQLGNDAAGNDVAV 205
           CVL F SL   L+ RCR ++GG   LG   +G+  A+
Sbjct: 31  CVLVFLSLGLVLSYRCRHRNGG--LLGRQQSGSQFAL 65


>AY062319-1|AAL65747.1|  111|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 111

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = -3

Query: 186 SCAASRYTCTTEAKHW---ANDRRQ*AAGTINHSTPDHVYSK 70
           SC AS YT TT A HW   A  +R    G IN    D  YS+
Sbjct: 13  SCKASGYTFTTYAMHWVRQAPGQRLEWMGWINPGNGDIKYSQ 54


>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains
           6 protein.
          Length = 1229

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
 Frame = +3

Query: 183 SCCCPGILRQRRCRQRHFPTDI---CRHVG 263
           SC CP   R  RC ++  P D+   CRH G
Sbjct: 869 SCLCPAGRRGPRCAEKCLPRDVRAGCRHSG 898


>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains
           6 protein.
          Length = 1229

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
 Frame = +3

Query: 183 SCCCPGILRQRRCRQRHFPTDI---CRHVG 263
           SC CP   R  RC ++  P D+   CRH G
Sbjct: 869 SCLCPAGRRGPRCAEKCLPRDVRAGCRHSG 898


>AF098865-1|AAD10823.1|  574|Homo sapiens squalene epoxidase
           protein.
          Length = 574

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -3

Query: 315 CVLQFQSLIFELALRCRSQHGGRCQLGNDAAGNDVAV 205
           CVL F SL   L+ RCR ++GG   LG   +G+  A+
Sbjct: 31  CVLVFLSLGLVLSYRCRHRNGG--LLGRQQSGSQFAL 65


>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
          Length = 1246

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
 Frame = +3

Query: 183 SCCCPGILRQRRCRQRHFPTDI---CRHVG 263
           SC CP   R  RC ++  P D+   CRH G
Sbjct: 886 SCLCPAGRRGPRCAEKCLPRDVRAGCRHSG 915


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,981,071
Number of Sequences: 237096
Number of extensions: 968941
Number of successful extensions: 6755
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6755
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3373625546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)