Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_C14
(502 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 6e-15
SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 65 4e-11
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 58 4e-09
SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 48 6e-06
SB_8405| Best HMM Match : PAN (HMM E-Value=0.044) 32 0.31
SB_37668| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_30230| Best HMM Match : CH (HMM E-Value=0.0035) 29 2.2
SB_29945| Best HMM Match : DUF125 (HMM E-Value=1.7) 29 2.2
SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41) 28 3.8
SB_4707| Best HMM Match : Toxin_17 (HMM E-Value=8.2) 28 3.8
SB_39949| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_13477| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 28 5.0
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0) 27 6.6
SB_28009| Best HMM Match : Zfx_Zfy_act (HMM E-Value=7.3) 27 6.6
SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_56079| Best HMM Match : RnaseH (HMM E-Value=8.1) 27 8.7
>SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 77.4 bits (182), Expect = 6e-15
Identities = 50/156 (32%), Positives = 74/156 (47%)
Frame = +2
Query: 11 AINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLLSY 190
A++ WI G P++K+ LGI GR++ L + ++ P A KGG+ GPYTK G ++Y
Sbjct: 241 AVDLWIAGGMPSNKIALGIPLYGRSFTLKTANKTLDAP---ATKGGQ-GPYTKEAGYIAY 296
Query: 191 PEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKAS 370
EIC + L DP P WV Y+D + K +
Sbjct: 297 FEIC-----------KMGLSVTRDP-------VLVSPYGVDVNNQWVGYDDVTSVQEKVN 338
Query: 371 YVKTKNLGGVSIMDLSMDDFRGLCTGDKYPILRAAK 478
Y+K K+L G + +DDF+G C YP++ A K
Sbjct: 339 YIKKKSLLGAMFWAMDLDDFKGDCGQGSYPLMTAVK 374
>SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 569
Score = 64.9 bits (151), Expect = 4e-11
Identities = 49/158 (31%), Positives = 69/158 (43%), Gaps = 2/158 (1%)
Frame = +2
Query: 11 AINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLLSY 190
A YWI GAP K+ LG+ T GR +KL +D G+ A+ G YT+ G L+Y
Sbjct: 354 AAQYWIDKGAPASKIALGLGTYGRAFKL-ADQTRHGL-KAPANGNPTRGQYTREPGFLAY 411
Query: 191 PEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKAS 370
EIC K+N + A + P G WV Y+D + K
Sbjct: 412 YEIC----------------KMNLQVTSTESSAVKAPYGH-VGDLWVGYDDEYSLSLKVE 454
Query: 371 -YVKTKNLGGVSIMDLSMDDFRG-LCTGDKYPILRAAK 478
+K K + G + +DDF+G C YP++ A K
Sbjct: 455 RVIKAKGMAGAMFWAIPLDDFKGQFCGKGPYPLINAVK 492
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 59.7 bits (138), Expect = 1e-09
Identities = 40/159 (25%), Positives = 73/159 (45%)
Frame = +2
Query: 11 AINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLLSY 190
A+ YW++ G P K+ LG++ G ++L ++ + P + +KG + PY
Sbjct: 623 AVKYWMEKGMPCGKIALGMANYGHAFELSDPTKTALGAPANVNKG-RSYPYY-------- 673
Query: 191 PEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKAS 370
E+C K P + ++P+K Y + G W++Y+D + G K
Sbjct: 674 -ELC----------KLPLTKVTDNPAK--APYGYH-------GSQWIAYDDVTSLGRKVE 713
Query: 371 YVKTKNLGGVSIMDLSMDDFRGLCTGDKYPILRAAKYRL 487
+K +NL G + +DDF +C +P++ A +Y L
Sbjct: 714 LIKKENLLGAMFWAIDLDDFGNVCGQGAHPLMGAVRYML 752
>SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 829
Score = 58.0 bits (134), Expect = 4e-09
Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 2/153 (1%)
Frame = +2
Query: 26 IQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLLSYPEICA 205
I+NG P +K+VLG+ T GR + L+S + G +AG YT +G L+Y EIC
Sbjct: 645 IRNGMPANKIVLGLGTYGRAFGLES----------AGNNGLDAGKYTGAKGFLAYFEICK 694
Query: 206 KLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKASYVKTK 385
+ +N K Y ++ G WV +++P + K V K
Sbjct: 695 MGLTVVENNKAK------------APYGYK-------GHDWVGFDNPKSLIYKIDNVVKK 735
Query: 386 N-LGGVSIMDLSMDDFRG-LCTGDKYPILRAAK 478
N L GV + +DDF G C KYP++ A K
Sbjct: 736 NQLRGVMFWAIDLDDFSGEHCGQGKYPLMSAVK 768
Score = 47.2 bits (107), Expect = 8e-06
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Frame = +2
Query: 143 GGEAGPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGG 322
G +G YT +G L+Y EIC + + H K N P Y ++ G
Sbjct: 277 GVHSGKYTDAEGFLAYYEICKRGLTV------VHKNKANAP------YGYK-------GK 317
Query: 323 FWVSYEDPDTAGNKASYVKTKN-LGGVSIMDLSMDDFRG-LCTGDKYPILRAAK 478
W+ ++DP++ K V KN L GV + +DDF G C KYP++ A K
Sbjct: 318 DWIGFDDPNSLVYKIDNVVKKNQLRGVMFWAIDLDDFSGEHCGQGKYPLMSAVK 371
>SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)
Length = 184
Score = 47.6 bits (108), Expect = 6e-06
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Frame = +2
Query: 155 GPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVS 334
GPYT+ G LSY EIC + P + +V P Y + + D + WV
Sbjct: 16 GPYTRESGFLSYYEICDMM--PKMKTMKTDQSEVRAP------YGY-VKQDWAD--VWVG 64
Query: 335 YEDPDTAGNKA-SYVKTKNLGGVSIMDLSMDDFRG-LCTGDKYPILRAAK 478
Y+D + K +K K L G L +DDF G C YP++ A K
Sbjct: 65 YDDERSLQLKVEEVIKAKGLAGAMFWALDLDDFDGSSCGKGNYPLMNAVK 114
>SB_8405| Best HMM Match : PAN (HMM E-Value=0.044)
Length = 387
Score = 31.9 bits (69), Expect = 0.31
Identities = 32/127 (25%), Positives = 48/127 (37%), Gaps = 6/127 (4%)
Frame = +2
Query: 20 YWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPI---HADKGGEAGPYTKVQGLLSY 190
YW G P +L LG+ T W IS + I H + G + + S
Sbjct: 222 YW---GTPFDRLCLGMKNTTTNWIAVPHEGISLLTLIKKQHTQTSLDVGTWKSLLPGSSL 278
Query: 191 PEICAKL---INPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGN 361
C K + N + + PS+ G R+ G GG+W +D ++ GN
Sbjct: 279 QTGCYKQGFNVTSGINSATARIGILAFPSECSGHALSRI--GFGTGGYWYGQDDENSCGN 336
Query: 362 KASYVKT 382
+A KT
Sbjct: 337 EADTSKT 343
>SB_37668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 284 YAFRLPDDXGEGGFWVSYEDPDTAGNKASYVKTKNLGGVSI 406
+ ++ PD +G V+YEDP TA + K+ G SI
Sbjct: 208 WIYKHPDGSSKGECTVTYEDPPTASAAIEWFNGKDFMGQSI 248
>SB_30230| Best HMM Match : CH (HMM E-Value=0.0035)
Length = 2440
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 323 FWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMD 424
F VS+++PD N + VK+K+ ++DLS D
Sbjct: 1796 FEVSFDEPDVITNMKTKVKSKDTVRKDLLDLSSD 1829
>SB_29945| Best HMM Match : DUF125 (HMM E-Value=1.7)
Length = 608
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = -3
Query: 446 QCKDH-ENHPWKGP*WTHRQGSLFSRN*LCFRPCQDLRKKPRSHLHHXHQEGGRHRSQNV 270
Q + H H W W H + ++R + + R PR H H++ G H +++
Sbjct: 255 QTRTHARRHAW----WEHEKAGTYTRRYIHRKDMAQTRTHPRRHAWREHKKAGTHTRRHM 310
>SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +3
Query: 120 FHRYTPIRVVKLVLIPKFKVY*ATQKFAPNLLTPTKTESVLIFVR 254
F RY P+R KL++ ++ TQ P + +++F R
Sbjct: 523 FTRYNPVRYAKLIVFTRYNPVRYTQLMVFTRYNPVRYAQLMVFTR 567
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/57 (21%), Positives = 26/57 (45%)
Frame = +3
Query: 84 RGSSIQTVKFPEFHRYTPIRVVKLVLIPKFKVY*ATQKFAPNLLTPTKTESVLIFVR 254
R + ++ + F RY P+R +L++ ++ TQ P + +++F R
Sbjct: 180 RYNPVRYTQLMVFTRYNPVRYTQLIVFTRYNPVRYTQLIVFTRYNPVRYTQLIVFTR 236
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/57 (21%), Positives = 27/57 (47%)
Frame = +3
Query: 84 RGSSIQTVKFPEFHRYTPIRVVKLVLIPKFKVY*ATQKFAPNLLTPTKTESVLIFVR 254
R + ++ + F RY P+R ++L++ ++ TQ P + +++F R
Sbjct: 152 RYNPVRYAQLMVFTRYNPVRYLQLLVFTRYNPVRYTQLMVFTRYNPVRYTQLIVFTR 208
Score = 27.5 bits (58), Expect = 6.6
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +3
Query: 120 FHRYTPIRVVKLVLIPKFKVY*ATQKFAPNLLTPTKTESVLIFVR 254
F RY P+R +L++ ++ TQ P + +++F R
Sbjct: 206 FTRYNPVRYTQLIVFTRYNPVRYTQLIVFTRYNPVRYAQLMVFTR 250
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/57 (21%), Positives = 27/57 (47%)
Frame = +3
Query: 84 RGSSIQTVKFPEFHRYTPIRVVKLVLIPKFKVY*ATQKFAPNLLTPTKTESVLIFVR 254
R + ++ ++ F RY P+R +L++ ++ TQ P + +++F R
Sbjct: 166 RYNPVRYLQLLVFTRYNPVRYTQLMVFTRYNPVRYTQLIVFTRYNPVRYTQLIVFTR 222
>SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41)
Length = 1017
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 370 TSFVSGRVRIFVRNPEATFTXIIRKAEGI 284
T + GR +IF+RNP F ++ +G+
Sbjct: 640 TEYAYGRTKIFIRNPRTLFALEEKRKDGM 668
>SB_4707| Best HMM Match : Toxin_17 (HMM E-Value=8.2)
Length = 121
Score = 28.3 bits (60), Expect = 3.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 409 HDGHTAKVLCFHVTSFVSGRVRIFVRN 329
HDG + +CFH S +R+ V+N
Sbjct: 72 HDGIVPRTICFHKLSCCDDPIRVVVKN 98
>SB_39949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 27.9 bits (59), Expect = 5.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 277 KTFARIVDLTKMRTLSVLVGVNKFGANFWVA 185
K FAR++ T +R + VL+ + FG + W A
Sbjct: 17 KQFARLLIKTPVRIVVVLLSLGLFGVSIWEA 47
>SB_13477| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 628
Score = 27.9 bits (59), Expect = 5.0
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 25 DSKWCAYPQTCPWYQHHWTYVEA 93
D + C+YP T PW WT + +
Sbjct: 80 DERNCSYPTTGPWTTRPWTPISS 102
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = +2
Query: 113 SGVPPIHADKGGEAGPYTK-VQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYA 289
SG+ + G P + G+ YP + + +P Q G P V D ++ +
Sbjct: 326 SGIEGLKGQSGPLGDPGDNGIDGISGYPGVPGRKGDPGQKGDPPRFVPVPDHGEKGQSGE 385
Query: 290 FRLPDDXGEGG 322
P + GE G
Sbjct: 386 PGFPGEIGEAG 396
>SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 915
Score = 27.5 bits (58), Expect = 6.6
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 71 TTGRTWKLDSDSEISGVPPIHADKGGEAGPYT-KVQGLLSYPEI 199
T G+TW E G+P + A GG A P + + +LS +I
Sbjct: 119 TAGKTWNASCFCEGRGMPLVGAVIGGAASPISLNIANVLSVNDI 162
>SB_28009| Best HMM Match : Zfx_Zfy_act (HMM E-Value=7.3)
Length = 677
Score = 27.5 bits (58), Expect = 6.6
Identities = 23/100 (23%), Positives = 41/100 (41%)
Frame = +2
Query: 137 DKGGEAGPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGE 316
D GE Y + S+ E ++ + +G++ + D TY L D GE
Sbjct: 146 DSHGEKATYILLDD--SHAEKATYILLGDSHGEKATYILLGDSHAEKATYIL-LDDSHGE 202
Query: 317 GGFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDFRG 436
++ +D + G KA+Y+ + G + +DD G
Sbjct: 203 KATYILLDD--SHGEKATYILLDDSHGEKATYILLDDSHG 240
Score = 27.1 bits (57), Expect = 8.7
Identities = 23/100 (23%), Positives = 42/100 (42%)
Frame = +2
Query: 137 DKGGEAGPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGE 316
D GE Y + S+ E ++ + +G++ ++D TY L D GE
Sbjct: 172 DSHGEKATYILLGD--SHAEKATYILLDDSHGEKATYILLDDSHGEKATYIL-LDDSHGE 228
Query: 317 GGFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDFRG 436
++ +D + G KA+Y+ + G + +DD G
Sbjct: 229 KATYILLDD--SHGEKATYILLDDSHGEKATYILLDDSHG 266
>SB_44749| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2250
Score = 27.5 bits (58), Expect = 6.6
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +2
Query: 317 GGFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDFRGLCTGDKYPILRAAK 478
GG WV + GN+ + T + G V I S + G Y I+R K
Sbjct: 1217 GGSWVDVDQDAYCGNRTRFNVTSSCGWVRIRFKSDESITGRGFNATYRIIRDRK 1270
>SB_56079| Best HMM Match : RnaseH (HMM E-Value=8.1)
Length = 264
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 496 KSLKSVFCGPQDRIFISSAKTTKIIHGKVHDGH 398
KS KSV G + +IF + +I+H H H
Sbjct: 24 KSFKSVVAGNKVKIFSDNQNVVRIVHNGSHVPH 56
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,248,043
Number of Sequences: 59808
Number of extensions: 382145
Number of successful extensions: 954
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1087245449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -