Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0006_C14
(502 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 39 0.002
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si... 38 0.003
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si... 37 0.007
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si... 37 0.007
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si... 36 0.012
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si... 35 0.027
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si... 34 0.047
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si... 31 0.44
At3g16460.2 68416.m02097 jacalin lectin family protein contains ... 31 0.58
At3g16460.1 68416.m02098 jacalin lectin family protein contains ... 31 0.58
At4g17880.1 68417.m02665 basic helix-loop-helix (bHLH) family pr... 30 1.0
At4g34350.1 68417.m04881 LytB family protein contains Pfam profi... 28 3.1
At4g25390.2 68417.m03653 protein kinase family protein contains ... 28 4.1
At4g25390.1 68417.m03652 protein kinase family protein contains ... 28 4.1
At4g20190.1 68417.m02952 hypothetical protein 27 5.4
At2g46530.2 68415.m05803 transcriptional factor B3 family protei... 27 5.4
At2g46530.1 68415.m05802 transcriptional factor B3 family protei... 27 5.4
At5g65630.1 68418.m08256 DNA-binding bromodomain-containing prot... 27 7.1
At5g57000.1 68418.m07114 expressed protein similar to unknown pr... 27 7.1
At2g36730.1 68415.m04506 pentatricopeptide (PPR) repeat-containi... 27 7.1
At4g27690.1 68417.m03981 vacuolar protein sorting-associated pro... 27 9.4
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si... 27 9.4
At3g07300.1 68416.m00869 eukaryotic translation initiation facto... 27 9.4
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 39.1 bits (87), Expect = 0.002
Identities = 38/152 (25%), Positives = 58/152 (38%)
Frame = +2
Query: 5 DAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLL 184
D+ + W + G P K VLG G W L +D +++G GP G +
Sbjct: 214 DSGVRDWTEAGLPAKKAVLGFPYYGWAWTL-ADPDVNGY------DANTTGPAISDDGEI 266
Query: 185 SYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNK 364
SY ++ +++ NG KV+D G Y + G W+ Y+ + K
Sbjct: 267 SYRQLQTWIVD---NG----ATKVHD-DMMVGDYCY-------AGTTWIGYDSEKSIVTK 311
Query: 365 ASYVKTKNLGGVSIMDLSMDDFRGLCTGDKYP 460
Y K K L G + DD L + P
Sbjct: 312 VIYAKQKGLLGYFSWHVGGDDNSELSSAGSTP 343
>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 379
Score = 38.3 bits (85), Expect = 0.003
Identities = 39/145 (26%), Positives = 53/145 (36%)
Frame = +2
Query: 5 DAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLL 184
DA WIQ G P K VLG G W+L + + S P G P G +
Sbjct: 236 DAGTRSWIQAGLPAKKAVLGFPYYGYAWRLTNANSHSYYAP---TTGAAISP----DGSI 288
Query: 185 SYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNK 364
Y +I +++ NG S G Y + G W+ Y+D + K
Sbjct: 289 GYGQIRKFIVD---NGATTVYN-----STVVGDYCY-------AGTNWIGYDDNQSIVTK 333
Query: 365 ASYVKTKNLGGVSIMDLSMDDFRGL 439
Y K + L G + DD GL
Sbjct: 334 VRYAKQRGLLGYFSWHVGADDNSGL 358
>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 332
Score = 37.1 bits (82), Expect = 0.007
Identities = 33/120 (27%), Positives = 49/120 (40%)
Frame = +2
Query: 5 DAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLL 184
D+ + WI++G P K VLG S G W L +D + +G A ++ G +
Sbjct: 229 DSGLKQWIKDGLPEKKAVLGFSYVGWAWTLQNDKD-TGYNAAAAGVAKSEDDVSE-DGSI 286
Query: 185 SYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNK 364
+Y +I N+ + KV DP K G Y F W+ YED + K
Sbjct: 287 NYAQI-------NKFIRDEEAAKVYDP-KVVGHYCFAKK-------IWIGYEDTQSVEAK 331
>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 363
Score = 37.1 bits (82), Expect = 0.007
Identities = 43/166 (25%), Positives = 62/166 (37%), Gaps = 1/166 (0%)
Frame = +2
Query: 5 DAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLL 184
D + WI+ G P K VLG G TW L S ++ + T +G +
Sbjct: 224 DYGLKEWIKAGLPAKKAVLGFPYVGWTWSLGSGND-----------AATSRVATSAEGSI 272
Query: 185 SYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNK 364
+Y +I +++ R V D S G Y F G + Y+D + K
Sbjct: 273 NYDQIKRLIVDHK-------ARPVFD-STVVGDYCF-------AGTSLIGYDDHQSVVAK 317
Query: 365 ASYVKTKNLGGVSIMDLSMDDFRGLC-TGDKYPILRAAKYRL*TFS 499
Y K K L G + DD GL G + + + L TFS
Sbjct: 318 VKYAKQKGLLGYFSWHVGADDNFGLSRAGSSFCTYESLFFSLFTFS 363
>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 362
Score = 36.3 bits (80), Expect = 0.012
Identities = 38/153 (24%), Positives = 61/153 (39%)
Frame = +2
Query: 5 DAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLL 184
D+ ++ W++ P K VLG S G W L+ D+E +G G G +
Sbjct: 225 DSGLSKWLEAKLPAKKAVLGFSYCGWAWTLE-DAENNGY------DAATDGAAISSDGSI 277
Query: 185 SYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNK 364
+Y +I +I+ NG +DP+ G Y + G W+ Y+D + +K
Sbjct: 278 TYAKIRNYIID---NG----AATFHDPAV-IGFYCY-------VGTTWIGYDDNQSIVSK 322
Query: 365 ASYVKTKNLGGVSIMDLSMDDFRGLCTGDKYPI 463
Y K K L G + D GL + +
Sbjct: 323 VRYAKLKGLLGYFSWHVGADYNCGLSRAGSFSL 355
>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 261
Score = 35.1 bits (77), Expect = 0.027
Identities = 36/152 (23%), Positives = 53/152 (34%)
Frame = +2
Query: 5 DAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLL 184
D+ + WI G P K VLG G W L P H GP G +
Sbjct: 127 DSGVKDWIDAGLPAEKAVLGFPYYGWAWTLAD-------PKNHGYYVDTTGPAISDDGEI 179
Query: 185 SYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNK 364
SY ++ +++ V+D + G Y + G W+ Y+ ++ K
Sbjct: 180 SYSQLKTWIVDNKAT-------TVHD-NIVIGDYCY-------AGTTWIGYDSEESIVTK 224
Query: 365 ASYVKTKNLGGVSIMDLSMDDFRGLCTGDKYP 460
Y K K L G + DD L + P
Sbjct: 225 VIYAKQKGLLGYFSWQVGGDDKSELSSAGSSP 256
>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 289
Score = 34.3 bits (75), Expect = 0.047
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 5 DAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSE 109
D + +W++ G P K V G G +W LD D +
Sbjct: 204 DTGLKHWLKAGLPEKKAVFGFPYVGWSWTLDDDKD 238
>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 366
Score = 31.1 bits (67), Expect = 0.44
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = +2
Query: 5 DAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLL 184
DA + W Q G P K VLG G W L +D++ H +GP G +
Sbjct: 234 DAGVRAWTQAGLPAKKAVLGFPLYGYAWCL-TDAK------NHNYYANSSGPAISPDGSI 286
Query: 185 SYPEI 199
Y +I
Sbjct: 287 GYDQI 291
>At3g16460.2 68416.m02097 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase binding protein [Brassica napus]
GI:1711296, GI:1655824, myrosinase-binding protein
homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
profile PF01419 jacalin-like lectin family
Length = 647
Score = 30.7 bits (66), Expect = 0.58
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +2
Query: 35 GAPTHKL-VLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLLSYPEICAKL 211
G+ KL G ST G +W D S+ GV I+A GGE Y K + L
Sbjct: 249 GSGAQKLEAQGNSTGGTSW--DDGSDYDGVTKIYASYGGEGIQYVKFDYVKGGVTKQGVL 306
Query: 212 INPNQNGKRPHLRKVNDPSK 271
Q+ + P +N P +
Sbjct: 307 HGKQQSRQNPREFVINHPDE 326
>At3g16460.1 68416.m02098 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase binding protein [Brassica napus]
GI:1711296, GI:1655824, myrosinase-binding protein
homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
profile PF01419 jacalin-like lectin family
Length = 705
Score = 30.7 bits (66), Expect = 0.58
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +2
Query: 35 GAPTHKL-VLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLLSYPEICAKL 211
G+ KL G ST G +W D S+ GV I+A GGE Y K + L
Sbjct: 249 GSGAQKLEAQGNSTGGTSW--DDGSDYDGVTKIYASYGGEGIQYVKFDYVKGGVTKQGVL 306
Query: 212 INPNQNGKRPHLRKVNDPSK 271
Q+ + P +N P +
Sbjct: 307 HGKQQSRQNPREFVINHPDE 326
>At4g17880.1 68417.m02665 basic helix-loop-helix (bHLH) family
protein bHLH protein, Arabidopsis thaliana,
PATCHX:E255557
Length = 589
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +2
Query: 257 NDPSKRFGTYAFRLPDDXGEG--GFWVSYEDPDTAGNKASYVKTKNLGGVSIMDLSMDDF 430
N+ FG++AF L D GE G W+S + +G A+ V N G S +
Sbjct: 253 NNGGGEFGSWAFNLNPDQGENDPGLWISEPNGVDSGLVAAPV-MNNGGNDSTSNSDSQPI 311
Query: 431 RGLCTG 448
LC G
Sbjct: 312 SKLCNG 317
>At4g34350.1 68417.m04881 LytB family protein contains Pfam profile:
PF02401 LytB protein
Length = 466
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +2
Query: 53 LVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLLSYPEICAK 208
LV+G + T L SE G+P D GP K+ L Y E+ K
Sbjct: 372 LVVGGWNSSNTSHLQEISEARGIPSYWIDSEKRIGPGNKIAYKLHYGELVEK 423
>At4g25390.2 68417.m03653 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 497
Score = 27.9 bits (59), Expect = 4.1
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +2
Query: 215 NPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKASYVKTKNLG 394
N + + +RP R+ + S R T +F + G+GGF V + + G + VK + G
Sbjct: 74 NASSSPRRPSPREFSYSSLRRATGSFSQANRLGQGGFGVVFRGTISGGENVA-VKVMDSG 132
Query: 395 GV 400
+
Sbjct: 133 SL 134
>At4g25390.1 68417.m03652 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 651
Score = 27.9 bits (59), Expect = 4.1
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +2
Query: 215 NPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGNKASYVKTKNLG 394
N + + +RP R+ + S R T +F + G+GGF V + + G + VK + G
Sbjct: 74 NASSSPRRPSPREFSYSSLRRATGSFSQANRLGQGGFGVVFRGTISGGENVA-VKVMDSG 132
Query: 395 GV 400
+
Sbjct: 133 SL 134
>At4g20190.1 68417.m02952 hypothetical protein
Length = 389
Score = 27.5 bits (58), Expect = 5.4
Identities = 19/88 (21%), Positives = 34/88 (38%)
Frame = -1
Query: 448 SSAKTTKIIHGKVHDGHTAKVLCFHVTSFVSGRVRIFVRNPEATFTXIIRKAEGIGPKTF 269
S+ +K I+ DG LC ++ F G+ R +++FT R ++
Sbjct: 195 SNTANSKSINS-FEDGFKCSALCLYLPGFSKGKPVRSSRKGDSSFT---RTTTMTSSQSM 250
Query: 268 ARIVDLTKMRTLSVLVGVNKFGANFWVA 185
AR + LS + +F W +
Sbjct: 251 ARTASIRDTAVLSARASLERFECGSWTS 278
>At2g46530.2 68415.m05803 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profiles: PF02309 AUX/IAA family, PF02362 B3 DNA binding
domain
Length = 514
Score = 27.5 bits (58), Expect = 5.4
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 192 QKFAPNLLTPTKTESVLIFVRSTILANVLG-PMPSAFL 302
+ F+P+ LTPT T+ RS ++ + G P+ S+FL
Sbjct: 263 EPFSPSALTPTPTQQQSKSKRSRPISEITGSPVASSFL 300
>At2g46530.1 68415.m05802 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profiles: PF02309 AUX/IAA family, PF02362 B3 DNA binding
domain
Length = 601
Score = 27.5 bits (58), Expect = 5.4
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 192 QKFAPNLLTPTKTESVLIFVRSTILANVLG-PMPSAFL 302
+ F+P+ LTPT T+ RS ++ + G P+ S+FL
Sbjct: 350 EPFSPSALTPTPTQQQSKSKRSRPISEITGSPVASSFL 387
>At5g65630.1 68418.m08256 DNA-binding bromodomain-containing protein
similar to 5.9 kb fsh membrane protein [Drosophila
melanogaster] GI:157455; contains Pfam profile PF00439:
Bromodomain
Length = 590
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 215 NPNQNGKRPHLRKVNDPSKRFGTYA 289
NPN N +R + K D S FG+YA
Sbjct: 44 NPNPNFERSNSSKQCDDSSEFGSYA 68
>At5g57000.1 68418.m07114 expressed protein similar to unknown
protein (gb|AAF21159.1)
Length = 187
Score = 27.1 bits (57), Expect = 7.1
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -3
Query: 341 LRKKPRSHLHHXHQE 297
L++KP HLHH H+E
Sbjct: 87 LKEKPPRHLHHHHKE 101
>At2g36730.1 68415.m04506 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 501
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 292 EGIGPKTFARIVDLTKMRTLSVLVGVNKFG-ANFW 191
EGIG K R+++L R+ ++++ N+F A W
Sbjct: 401 EGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMW 435
>At4g27690.1 68417.m03981 vacuolar protein sorting-associated
protein 26, putative / VPS26, putative similar to
vacuolar sorting protein 26 [Homo sapiens] GI:9622852;
contains Pfam profile PF03643: Vacuolar protein
sorting-associated protein 26
Length = 303
Score = 26.6 bits (56), Expect = 9.4
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 457 IFISSAKTTKIIHGKVHDGHTAKVLCFHVTSFVSGRVRI 341
I S K K + K +G TA V FH +SG+V I
Sbjct: 16 ITFSDGKNRKQVPMKKENGQTALVPLFHSQDTISGKVCI 54
>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 365
Score = 26.6 bits (56), Expect = 9.4
Identities = 33/132 (25%), Positives = 52/132 (39%), Gaps = 1/132 (0%)
Frame = +2
Query: 5 DAAINYWIQNGA-PTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGL 181
++ + W+ P K VLG G W L+ D+E +G A G P G
Sbjct: 234 NSGLRKWLDEAKLPPKKAVLGFPYCGWAWTLE-DAENNGYDA--ATDGAAISP----DGS 286
Query: 182 LSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDXGEGGFWVSYEDPDTAGN 361
++Y +I +++ NG +DP+ G Y + G W+ Y+D +
Sbjct: 287 ITYAKIRNYIVD---NGAATF----HDPAV-IGFYCY-------VGNTWIGYDDNQSIVY 331
Query: 362 KASYVKTKNLGG 397
K Y K L G
Sbjct: 332 KVKYAKFTGLLG 343
>At3g07300.1 68416.m00869 eukaryotic translation initiation factor
2B family protein / eIF-2B family protein similar to
SP|P49770 Translation initiation factor eIF-2B beta
subunit (eIF-2B GDP-GTP exchange factor) {Homo sapiens};
contains Pfam profile PF01008: Initiation factor 2
subunit family
Length = 407
Score = 26.6 bits (56), Expect = 9.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 380 TKNLGGVSIMDLSMDDFRGLCTGDKYPILRAA 475
T +GG+ ++D S DD C G +P + AA
Sbjct: 93 TAAMGGLDLLDASDDDDVDNCKGIGFPAMSAA 124
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,274,363
Number of Sequences: 28952
Number of extensions: 275696
Number of successful extensions: 765
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 888318720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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