Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0006_C12
         (445 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    24   0.56 
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    24   0.56 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   0.98 
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    23   1.7  

>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 136 VTEMDASVPTGTKCLASQPLPSHHSTHN 53
           VT+     PTG+  L +Q + +HH  H+
Sbjct: 143 VTQNGVLGPTGSPPLTTQSMNNHHMGHH 170


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 24.2 bits (50), Expect = 0.56
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 136 VTEMDASVPTGTKCLASQPLPSHHSTHN 53
           VT+     PTG+  L +Q + +HH  H+
Sbjct: 145 VTQNGVLGPTGSPPLTTQSMNNHHMGHH 172


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 23.4 bits (48), Expect = 0.98
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +1

Query: 7   SARSVPTVNVLSLSSGCGYCGDWVV 81
           +A+ +PT+ + +L    G+C  WV+
Sbjct: 157 AAKGLPTLKLFALHEFYGFCYLWVL 181


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 163 INHYVLRDYVTEMDASVPTGT 101
           I+ Y   D+VT+   ++P GT
Sbjct: 64  ISRYASEDFVTKTGNTIPEGT 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,729
Number of Sequences: 336
Number of extensions: 2728
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9985735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)